Sphingopyxis sp. J-6: V6U71_18815
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Entry
V6U71_18815 CDS
T10764
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_18815
Transporters [BR:
spjj02000
]
Other transporters
Pores ion channels [TC:
1
]
V6U71_18815
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
XMG39876
LinkDB
All DBs
Position
complement(3956466..3959537)
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AA seq
1023 aa
AA seq
DB search
MDATSLAFLSTTAAAIAFAATPAAAQTGDDEIIVTGSRIAKNEFTSADPIQVIDPETAKR
QGQVQLADVLQSTPAAQGSIQITSAISNRFVANGGNDVQTVSLRGLGAERTLVLINGRRA
GPAGIRGSVAPFDLNVLPLSVARQVEVLKTGASSIYGSDAVAGVVNILTRNDLNGFEGGG
FSSVTEHGGGESYGVDASFGKTFDRGHFFATVDYFRQQNLTRRDRGFLFCSEEYLKREAD
GSRADIVDFRTGRPACSSTQANMIVFSDFSGIDENGFPTFGPGLIAPNGQAIFAGQYGNQ
FAGVGIPINTYNPIGVFGPADFFGVNFDGPSTGALNQFEPVEQNMDVFSDVRRVSAFVEG
AYDVTDAITAYGEFLFSNRKSHSNGFQRIELEQFTGASVLPFFLCNPAANNCDPTDLGDP
FNGEFAGNIILRPRVLVKSESSANVDYYRGVLGLRGTLGGGWKWDVSGQHSRSDASYTQD
VIYRDAVASQTLRTRSCAGTETAIRGVPCIDIDFTDPRVLRGDFTPEERAFLTGRETGRT
LFKQTSAEALLTGKLFDLPAGAVSTAFGANIRRDEIDDTPGEATLAGNVANFTTSGITAG
RTVSKEIFGEVEIPLLAGVPMIERLTLSGAARYTHVAATSRGGAKDSFSDTTWKVGADWA
VTDWLRFRGTWGTSFRAPALFELFLEDQTGFLGQQDIDPCIQTGARLAAGAISQRIFDNC
AAAGIAPDYAGGIGPATIVSGGGIGRLKPETSTAKTVSVILTPDLSGALWGGLKARLAVD
YFDIRVKDEITLLGAGNIVRGCYDSDFADEPLCDLFTRVTAGPDAQSIATVTDRYVNISR
QRNRGVDLSLAIDQDLGNLGALAFRAQMTWQVEDKVALFPGTEIDDNGKIGNPKWVGDFN
LGWTKGGWTLFYGLDVTGAASNMKDLLRAQGGDACRTSSFRPGGRFCPDVSVPATFYHSL
SLSRDVAERFRITLGVANLFDTPPPRVSTVVAATPPVIGQAPAFGTQYDYLGRRFFLSVR
GKL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggatgccacctccctggcgtttctgagcaccacagccgcggcgatcgcatttgccgcg
acgcccgctgcggcgcagacgggcgatgacgagatcatcgtcaccggatcgcgcatcgcg
aagaatgaattcaccagcgccgatccgattcaggtcatcgaccccgaaacggcgaaacgg
caggggcaggtccagcttgccgacgtcctgcagtcgaccccggccgcgcaggggtcgatc
cagatcacctcggcgatctcgaaccgcttcgtcgccaatggcggcaacgacgtgcagacg
gtgtcgctccgcggcctcggcgccgagcgcacgctggtgctgatcaacggccgccgcgcc
ggtccggcgggtatccgcgggtcggtcgcgcccttcgacctcaacgtgctgccgctgtcg
gtggcgcgccaggtcgaagtgctcaagaccggcgcgtcgtcgatctatggctcggatgcg
gtcgcgggcgtggtcaacatcctcacccgcaacgacctgaacggcttcgagggcggcggc
ttttcgtcggtcaccgagcatggcggcggcgaaagctatggcgtcgatgccagcttcggc
aagacattcgaccgggggcattttttcgcgacagtcgactatttccgccagcagaacctc
acccgccgcgaccgcggtttcctgttctgctcggaggaatatctgaagcgcgaagctgac
ggcagccgcgccgacatcgtcgattttcgcaccgggcgccccgcgtgcagcagcacgcag
gccaatatgatcgtcttcagcgatttttcggggatcgacgagaacgggttcccgaccttc
ggccccgggctgatcgcgccgaacgggcaggcgatcttcgcgggccaatatggcaatcaa
ttcgccggcgtcggcattccgatcaatacctacaacccgatcggcgtgttcggccccgcc
gatttcttcggggtcaatttcgacggtccgtcgaccggcgcgctcaaccagttcgagccg
gtcgagcagaatatggacgtgttttcggatgtgcgccgcgtcagcgccttcgtcgaaggc
gcctatgacgtcaccgacgcgatcaccgcctatggcgaatttctgttcagcaaccgcaag
tcgcacagcaacggtttccagcggatcgaactcgaacagttcaccggcgcatcggtgctg
ccctttttcctctgcaaccccgcggcgaacaactgcgatcccaccgacctgggcgatccg
ttcaacggcgagtttgccggcaacatcatcctgcgcccgcgcgtgctggtgaagtcggaa
agcagcgcaaacgtcgattattaccgcggcgtgctcggcttgcgcggcacgctgggcggc
ggctggaaatgggatgtgagcggccagcacagccgttcggacgccagctatacgcaggac
gtcatctatcgcgacgcggttgcatcgcagaccttgcgcacgcgttcgtgcgccgggacc
gagaccgcgatccgcggcgttccgtgcatcgacatcgatttcaccgacccgcgcgtgctg
cgcggcgatttcacgccggaggagcgcgccttcctgaccggccgcgagacgggccgcacg
ctgttcaagcaaacgtcggccgaagcgctgctcaccggcaagctgttcgatctgcctgcg
ggtgccgttagcacggcgttcggcgccaatatccgccgcgacgaaatcgacgacacgccc
ggcgaagcgacgctggcgggtaacgtcgccaatttcacgacctcggggattaccgccggg
cgtaccgtgtcgaaggaaatcttcggcgaggtcgaaatccccttgctcgcaggcgtgccg
atgatcgagcggctgacgctgtcgggcgcggcgcgctatacgcatgtcgcggcgacatcg
cgcggcggggcgaaagacagcttcagcgatacgacatggaaggtcggcgcagactgggcc
gtgaccgactggctgcgtttccgcggcacatgggggacctcgttccgcgccccggcgctg
ttcgaactcttccttgaggaccagacgggtttcctcggccagcaggacatcgatccgtgc
atccagaccggcgcaaggctcgcggccggcgcgatcagtcagcgcattttcgacaattgc
gccgccgccggcatcgcacccgactatgcgggcgggatcgggcccgcgacgatcgtgtcg
gggggcggcatcggccgactgaagcccgagacctcgaccgcgaagacggtgtcggtcatc
ctgacgcccgacttgtcgggggcgctgtggggcgggctcaaggcgcggctcgccgtcgac
tatttcgacatccgggtgaaggacgagatcaccctgctcggcgcgggcaatatcgtgcgc
ggctgttatgattccgatttcgccgacgaacccttgtgcgacctgttcacgcgcgtcacc
gcgggccccgatgcgcagagcattgcgacggtgaccgaccgctatgtcaacatcagccgc
cagcgcaatcgcggcgtcgacctgtcgctggcgatcgatcaggatcttggcaatctcggc
gcgctggcgttccgcgcgcagatgacgtggcaggtcgaggacaaggtcgcgctgttcccc
ggcaccgaaatcgatgacaatggcaagatcggcaatccgaaatgggtcggcgatttcaac
ctcggctggaccaaggggggatggacgctgttctatggcctcgacgtcaccggtgcagcg
tcgaacatgaaagatctgctgcgcgcgcagggcggcgatgcctgccgcacgtcgagcttc
cggccgggcggccgcttctgtcccgacgtcagcgtgcccgcgaccttctatcattcgctg
tcgctgagccgcgacgtcgccgaacgcttccggatcacgctgggggtcgcaaacctgttc
gataccccgccaccgcgcgtctcgaccgtcgtcgccgcaaccccgccggtgatcggccag
gcgcctgcgttcgggacgcaatatgattatctggggcggcgtttcttcctcagcgtgcgc
ggcaagctgtaa
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