Sphingopyxis sp. J-6: V6U71_18875
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Entry
V6U71_18875 CDS
T10764
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
spjj03110
]
V6U71_18875 (clpB)
Chaperones and folding catalysts [BR:
spjj03110
]
Heat shock proteins
HSP100
V6U71_18875 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_7
TniB
IstB_IS21
Mg_chelatase
AAA_24
RuvB_N
NACHT
AAA_25
NBD_SMAX1
DNA_pol3_delta2
T2SSE
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
XMG39887
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All DBs
Position
3979972..3982554
Genome browser
AA seq
860 aa
AA seq
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MNLEKFTDRAKGFLQAAQTIAIRLNHQRIAPEHIAKALLEDNEGMAAGLIAKSGGDAARA
VAGIDALLARVPAVSGSGAQQTPGLDNDAVRLLDQAEQVASKAGDGYVTVERLLLAMVLS
ATTPVGKAFADAGVTADALNKAINDLRGGRTADTASAEDRYEALKKFARDLTEVAREGKL
DPVIGRDEEIRRTIQILARRTKNNPVLIGEAGVGKTAIAEGLALRIVNGDVPDSLKDRRL
LSLDMGALIAGAKYRGEFEERLKGVLDDVKAAEGEIILFIDEMHTLVGAGKGEGAMDASN
LLKPALARGELHCIGATTLDEYRKHVEKDPALQRRFQPVFVGEPTVEDSISILRGIKEKY
ELHHGVRITDGAIVAAATLSNRYISDRFLPDKAIDLMDEAASRIRMEVESKPEEIEGLDR
RIIQMKIEEAALGKESDAASKDRLATLQSELANLEQQSAGLTQKWHAEKDKIHAEAKIKE
ELDAARSALDQAQRAGDLAKAGELSYGTIPGLEKQLEAAQAAAGNAMLREEVTADDIAAV
VSKWTGIPVDRMMEGEREKLLGMEATLEKRVIGQDEAVRAVSTAVRRARAGLQDPNRPLG
SFLFLGPTGVGKTELTKALARFLFDDDNAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEG
GTLTEAVRRRPYQVVLFDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFTNTLIILTSN
LGSQAIAALPDDAPVEQAEPAVMEVVRAHFRPEFLNRLDEIVLFNRLAQQHMGGIVDIQV
ARVQKLLTDRKVTLDLTDAARAWLGRVGYDPVYGARPLKRAVQRYLQDPLADLILKGEVK
DGSTIKVDEGDGALVLTPAG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgaaaaatttaccgatcgcgccaagggctttttgcaggcggcgcagacgatc
gcgatccgcttgaaccatcagcggatcgcgcccgagcatatcgcgaaagcactgctcgaa
gacaatgaaggcatggccgcgggcctgatcgcgaagagcggcggcgacgccgcgcgcgcg
gtcgcaggcatcgacgcgctgctcgcgagggtgcccgcggtgtcgggatcgggcgcgcag
caaacgccggggctcgacaatgacgcggtgcgcctgctcgaccaggccgaacaggtcgcg
agcaaggcgggcgacggttatgtgaccgtcgagcggctgctgctcgccatggtgctttct
gccacgaccccggtcggcaaggcgttcgccgacgcgggcgtcacggccgacgcgctcaac
aaggcgatcaacgacctgcgcggcgggcgtaccgccgacaccgcctcggccgaagaccgc
tatgaggcgctcaagaaattcgcgcgcgatctcaccgaagtcgcgcgcgagggcaagctc
gaccccgtcatcggccgcgacgaggaaatccgccgcacgatccagatcctcgcgcgccgg
accaagaacaacccggtgctgatcggcgaagccggcgtcggcaagaccgcgatcgccgaa
ggcctggcgctgcgcatcgtcaacggcgacgtgcccgacagcctgaaggaccgccgcctg
ctgtcgctcgacatgggcgcgctgatcgcgggcgccaaatatcgcggcgagttcgaggag
cgtctcaagggcgtgctcgacgacgtgaaggccgccgagggcgagatcatcctgttcatc
gacgagatgcacacgctggtcggcgcgggcaagggcgagggcgcgatggacgcctcgaac
ctgctgaagccagcattggcacgcggcgagctccactgcatcggcgcgacgacgctcgac
gaatatcgcaagcatgtcgaaaaggacccggcgctgcagcggcgtttccagccggtgttc
gtcggcgaaccgacggtcgaggattcgatctcgatcctgcgcgggatcaaggagaaatat
gagctgcaccacggggtgcggatcaccgacggcgcgatcgtcgccgccgcgacgctgtcg
aaccgttatatctccgaccgcttcctgcccgacaaggcgatcgacctgatggacgaggcg
gcgagccgcatccgcatggaggtcgaatcgaagcccgaggagatcgaagggctcgaccgc
cggatcatccagatgaagatcgaggaagccgcgctcggcaaggagagcgacgccgcatcg
aaggaccggctcgcgaccttgcagtccgaactcgccaatctcgagcagcagtcggccggg
ctcacccagaaatggcatgccgagaaggacaagatccacgccgaggcgaagatcaaggaa
gagctcgacgcagcgcgttcggcgctcgaccaggcgcagcgcgcgggcgacctcgcgaag
gcgggcgaactcagctatggcaccatccccgggctcgaaaagcagctcgaagcggcgcaa
gccgcggcgggcaatgcgatgctccgcgaggaagttaccgccgacgacatcgccgcggtg
gtcagcaagtggactggcatccccgtcgaccggatgatggaaggcgagcgcgagaaattg
ctcggcatggaagcgacgctcgaaaagcgcgtgatcgggcaggacgaggcggtgcgcgcc
gtctcgaccgcggtgcgccgcgcgcgcgcggggctgcaggaccccaaccggccgctcggc
agcttcctgttcctcggcccgacgggcgtcggcaagaccgagctcaccaaggcgctcgca
cgtttcctgttcgacgacgacaatgcgatggtccgcatcgacatgtccgagttcatggag
aagcacagcgtcgcgcggctcgtcggcgcgcccccgggctatgtcggctatgaggaaggc
ggcacgctcaccgaggcggtgcggcgccggccctatcaggtcgtgctgttcgacgaggtc
gaaaaggcgcatcaggacgtgttcaacatcctgctgcaagtgctcgacgacgggcgcctc
accgacgggcagggccgcacggtcgacttcaccaacaccctgatcatcctgacctcgaat
ctcggcagccaggcgatcgcagcgctgcccgacgatgcgccggtcgagcaggccgagcct
gcggtgatggaagtcgtgcgcgcgcatttccggcccgagttcctgaaccggctcgacgag
atcgtgctcttcaaccgcctcgcgcagcagcatatgggcggcatcgtcgacattcaggtc
gcacgcgtccagaagctgctgaccgatcgcaaggtgacgctcgacctcaccgacgcggcg
cgcgcgtggctcggccgcgtcggttacgatccggtctatggcgcccggccgctcaagcgc
gccgtgcagagatatctgcaggacccgctcgccgacctgatcctgaagggcgaggtcaag
gacgggtcgacgatcaaggtcgacgaaggcgacggggcgctggtgctgacacctgccggc
tga
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