Sphingopyxis sp. J-6: V6U71_19190
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Entry
V6U71_19190 CDS
T10764
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00071
Fatty acid degradation
spjj00362
Benzoate degradation
spjj00650
Butanoate metabolism
spjj01100
Metabolic pathways
spjj01120
Microbial metabolism in diverse environments
spjj01200
Carbon metabolism
spjj01212
Fatty acid metabolism
Module
spjj_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
V6U71_19190
09103 Lipid metabolism
00071 Fatty acid degradation
V6U71_19190
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
V6U71_19190
Enzymes [BR:
spjj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
V6U71_19190
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Paralog
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Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Semialdhyde_dh
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
XMG39948
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Position
4046168..4048201
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AA seq
677 aa
AA seq
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MSEETPNSVTMEKDGEVAVVIVNNPPVNALSWHVREGLANHFAAALADDSVKAIVLRCDG
STFIAGADISEFGKAPRGPDFNAVLNSIEAATKPVVAAIHGTALGGGLETALVCHYRVAV
PSAKLGVPEVKLGLLPGAGGTQRLPRVVGVEAAATMTSLGEPIPAAKAKDLGLVDALAGE
DSLAADAIAFARTKIADGPRPTRERKVFGDVAVIEQLKAANAKRWRGFDAPYANLACVEA
ATRLPFDEGLAFEREEFTKLMFGSQSAAQRHIFFAERQAAKIDGLPKDIKLRDIKRVGII
GAGTMGGGIMMNFLQKGIACTIVEMQQDALDRGLGVIRKNYDASAAKGRFKPEQVDQMMG
LITPSLDLEALADCDLIIEAVYEDMGVKKEIFGKLDQIAKPGAILASNTSYLDVNEIAAA
TSRPGDVLGMHFFSPANVMKLLEVVRGDKTADDVLATAMAIGKKIGKVAVVAGVCHGFIG
NRMLAPRQIEAQKLLLEGATPAQVDKVHTDFGMPMGPFQMSDLAGVDIGWHRDPNRIESI
RDALCAEGRWGQKKQAGFYDYDDKRNPSESARVAEIIDEFRKKAGIEKREVTDQEIVERT
LYPMVNEGALILAEGKAQRASDIDVVWIYGYGWPVYRGGPMFWAGLEGTDKIAAALENHG
FEVAPLLKEKAAAKAGF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaaacccccaacagcgtcacgatggaaaaggacggcgaagtcgccgtcgtc
atcgtcaacaacccgccggtcaacgcgctgagctggcatgtccgcgaagggctggccaat
catttcgccgcagcgctcgccgacgatagcgtcaaggcgatcgtgctgcgctgcgacggc
agcaccttcatcgccggcgccgatatcagcgagttcggcaaggcgccgcgcggtcccgat
ttcaatgcggtgctgaacagcatcgaagccgcgaccaagccggtcgtcgccgcgatccac
ggcacggcgctcggcggcgggctcgaaaccgcgctcgtgtgccattatcgcgtcgccgtg
ccctcggcgaagctcggcgtccccgaagtcaagctcggcctgctgcccggtgccggcggt
acccagcgcctgccgcgtgtggtcggggtcgaggccgcggcgacgatgacctcgctcggc
gagccgattccggccgccaaggcgaaggatctcggcctcgtcgacgcgctcgcgggcgag
gacagcctggccgccgacgccatcgcctttgcccgcacgaagatcgccgacggcccgcgc
ccgacgcgcgaacgcaaggtgttcggcgacgtcgcggtgatcgaacaactcaaggcggcg
aacgccaagcgctggcgcggcttcgacgcgccttatgccaacctcgcctgcgtcgaggcg
gcgacccggctgccgttcgacgagggcctcgccttcgagcgcgaggaattcaccaagctg
atgttcggcagccagtcggcggcgcagcgccacatcttcttcgccgagcgtcaggcggca
aagatcgacggcctgcccaaggatatcaagctgcgcgacatcaagcgcgtcggcatcatc
ggcgccggcacgatgggcggcggcatcatgatgaacttcctgcagaaaggcatcgcctgc
acgatcgtcgagatgcagcaggacgcgctcgaccgcggcctcggcgtcatccgcaagaat
tacgacgcctcggccgccaagggccgcttcaagcccgaacaggtcgaccagatgatgggc
ctcatcaccccgtcgctcgacctcgaagcgctcgccgactgcgacctgatcatcgaggcg
gtctatgaggatatgggcgtcaagaaggagattttcggcaagctcgaccagatcgccaag
cccggcgcgatcctcgcgtcgaacaccagctatctcgacgtcaacgagatcgcggcggcg
accagccgtcccggcgacgtgctgggcatgcacttcttctcgcccgccaacgtcatgaag
ctgctcgaggtcgtgcgcggcgacaagaccgccgacgatgtcctcgcgaccgcgatggcg
atcggcaagaagatcggcaaggtcgcggtcgtcgcgggcgtctgccacggcttcatcggc
aaccgcatgctcgcaccgcgccagatcgaggcgcagaagctgctgctcgaaggcgccacc
ccggcacaggtcgacaaggtccacaccgatttcggcatgccgatgggtccgttccagatg
agcgacctcgcgggcgtcgacatcggctggcaccgcgacccgaaccggatcgaaagcatc
cgcgacgcgctgtgcgccgagggccgctggggccagaagaagcaggcgggcttctacgac
tatgacgacaaacgcaatccgtcggaaagcgcgcgcgtcgccgagatcatcgacgaattc
cgcaagaaggcggggatcgaaaagcgcgaagtgaccgatcaggagatcgtcgagcgcact
ctctatccgatggtcaacgaaggcgcgctgatcctcgccgagggcaaggcgcagcgcgcg
agcgacatcgatgtcgtgtggatctacggctatggctggccggtctatcgcggcggcccg
atgttctgggccgggctcgaaggcaccgacaagatcgccgccgcgctggaaaaccacggc
ttcgaggtcgcgccgctgctcaaggaaaaggcggcggcgaaggccggtttctga
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