Sphingopyxis sp. J-6: V6U71_20535
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Entry
V6U71_20535 CDS
T10764
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
spjj Sphingopyxis sp. J-6
Pathway
spjj00550
Peptidoglycan biosynthesis
spjj01100
Metabolic pathways
spjj01501
beta-Lactam resistance
Brite
Enzymes [BR:
spjj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
V6U71_20535
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6U71_20535
Glycosyltransferases [BR:
spjj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
V6U71_20535
Peptidoglycan biosynthesis and degradation proteins [BR:
spjj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
V6U71_20535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XMG42709
LinkDB
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Position
complement(4315652..4317757)
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AA seq
701 aa
AA seq
DB search
MRRLFRWGLGLALVGAVAVAVAVGIAVQRIPSFEELKKSPAGQTIRIHAADGTVFLSLGP
NYGRWLTLRETPQVMQDAMVAVEDRRFRYHPGVDPVGMARAAAVAVKNRGSGRRLQGAST
ITQQLARNIFLSNSYTWTRKMREMVLALALEWKFSKDELLELYLNKVYFGGGSYGIDAAS
RRFFGHSATEMSLSEAAVVAGLVKAPSRYSPTADAQAALGRAGVVLDVMVDAGVITQAQA
DGAEPANVQLAAETGQNSARYFTDWALPQLDMLIDEGSEALDVYTTIDLGMQRAATASIQ
ANVPKGVQGALVALDRDGAVRAMIGGTDYVTSNYNRATQALRQPGSAWKLFVYMAALESG
YKVDDEVVDEPVTINGWSPRNSSGRFSGAMTLRTAFAYSVNTVAAKLGDEVGFSAVANMA
RRFGITTPVNTHPSMVLGSAEVRAIDMTAAFAAVARKGVSVQPYGITKVTTADGRLLYQR
PAERGQVLVDNWVAAGITDLLQTAVATGTGKAAQIGRPVAGKTGTTSSNKDGWFLGFSSG
ITTGVWMGRDDAKPVGGLQGGRAPAKAFADFMRVAVARRPVEAFDTEVKLPEWQLEEEDD
AYFGAPEEGGGGLTDENGMPIELPYDSRPPQGDAPPAAPSQDDGPVLNQQWIEEQTGRRP
PPENGAAPKAPPQTKAPAQPKVVVPPVVKAPPREPARTDGN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccgcctgttccgctggggactcgggctcgcgctcgtcggcgcggtcgcggtggcg
gtcgccgtcggcatcgctgtgcagcgtatcccgagcttcgaggagctcaagaaatcgccc
gccggtcagacgatccgcatccatgccgccgacggcaccgtctttctgtcgctcgggccc
aattacgggcgctggctgaccctgcgcgaaacgccgcaggtgatgcaggacgcgatggtc
gcggtcgaggaccggcgcttccgctatcatcccggggtcgatcccgtcggcatggcgcgc
gctgcggcggtcgcggtgaagaatcgcggcagcggccgccgcctgcagggcgcctcgacg
atcacccagcagctcgcacgcaacatcttcctgtcgaacagctacacctggacgcgcaag
atgcgcgaaatggtcctcgcactggcgctcgaatggaaattctcgaaagacgagctgctc
gaactctatctcaacaaggtctatttcggcggcggcagctatggcatcgacgccgcctcg
cggcgcttcttcgggcatagcgcgaccgaaatgtcgctctcggaggcggcggtggtcgcg
gggctggtcaaggcgccgtcgcgctattcgccgaccgccgacgcgcaggcggcgctgggc
cgcgcgggggtcgtgctggacgtcatggtcgacgcgggggtgatcacgcaggcacaggcg
gatggcgccgagcccgccaacgtccagctggcagcggaaacggggcagaacagcgcgcgc
tatttcaccgactgggcgctgccgcagctcgacatgctgatcgacgagggcagcgaggct
ttggacgtctatacgacgatcgacctcggcatgcagcgcgcggcgaccgcatcgatccag
gccaatgtgccgaagggcgtgcagggcgctcttgtcgcgctcgaccgcgacggtgcggtg
cgcgcgatgatcggcggcaccgactatgtcacctcgaactacaaccgcgcgacgcaggcg
ctgcgccagccggggtcggcgtggaaattgttcgtctatatggcggcgctcgaatcgggc
tataaggtcgacgacgaagtggtcgacgaaccggtgacgatcaacggctggtcgccgcgc
aactcgtcggggcgcttttcgggtgcgatgacgctgcgcaccgccttcgcctattcggtc
aacaccgtcgccgccaaactgggcgacgaggtcggcttttcggcggtcgccaatatggcg
cgccgcttcgggatcacgacgccggtcaacacccacccgtcgatggtgctcggcagcgcc
gaggtgcgcgcgatcgacatgaccgccgccttcgccgcggtggcgcgcaagggtgtatcg
gtgcaaccctatggcatcaccaaggtcaccactgccgacggccgtctgctctaccagcgt
ccagcggagcgcgggcaggtgctggtcgacaactgggtcgccgcgggcatcaccgacctc
ctgcagaccgcggtcgcgaccggcaccggcaaggcggcgcagatcggccgccccgtcgcg
ggcaagaccggcacgacgtcgagcaacaaggacggctggttcctcggcttttcgagcggc
atcaccaccggcgtctggatgggccgcgacgatgcgaaacccgtcggcgggctgcaaggc
ggccgcgcgccggccaaagcctttgccgatttcatgcgcgtcgcggtcgcgcggcgtccc
gtcgaggccttcgataccgaggtcaagctgcccgaatggcagctcgaggaagaggatgac
gcctatttcggtgcccccgaagaaggcggcggcggactgaccgacgagaatggcatgccg
atcgaactgccctatgacagccgcccgccgcagggcgatgccccgccggcggcgccgtcg
caggacgacgggccggtgctcaaccagcagtggatcgaggagcagacgggccggcgaccg
ccgcccgaaaacggcgccgcgcccaaggcgccaccgcagacgaaagcgcccgcacagcca
aaggtcgtggtccccccggtggtgaaagcacccccgcgcgaaccggcgcggaccgacggc
aactag
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