Sphingopyxis sp. J-6: V6U71_21740
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Entry
V6U71_21740 CDS
T10764
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_21740
Transporters [BR:
spjj02000
]
Other transporters
Pores ion channels [TC:
1
]
V6U71_21740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
XMG40439
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All DBs
Position
4546928..4549969
Genome browser
AA seq
1013 aa
AA seq
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MKLTIRAALRGSLCAAALVAGFSGSAGAAECLLDTNDDGVVDAADTDGGAVSDGSGSTLA
CGVGADATGTNNTAIGGSASAPGDLNTAVGYNARVRAQVSGVAVGANATAETDFAVAVGA
GSAANGEGAVAMGASASAYEQSVAIGQRASAGSNAIAIGSAASGFPQTVASDVNTIAIGS
GASALFMHGVAIGSSAYSNGAGSVALGDAARATSDYALALGVGAEATEMNALAIGLNATA
SNSSGIAIGREAGSSGELAVALGDSAGASGGLSMALGYEARAGHYNSVALGSFSTTGEDN
VISVGYVGGERRITHIAAGVNDTDAVNLAQLNAALDGENEYFAVSGTEPGAQANGQYSTA
GGEQARAESQGATVIGYHAQSLSDDSSAFGREAYTNGYRAASFGAFARADNNYATAIGGE
AIARDRRSTAIGHNAIAGSSGLSGSLGQVAVGAGSRAENDFSTALGTDAVAFSSASVAVG
GEANVTGNAAVAVGYRANVTGDNSVALGNGSQATRANSVSVGATGSERQIVSVAAGTEGT
DAVNLDQLNAVGTTANTALANAATAQGVADTALANAATAQSTADAALAAVTSAQGDAGAA
LAAANDAQATAGEALANAATAQSAAASAQGTADTAIANAATAQASADAAQATADTALADA
ATAISTANQANATADLALARVDEVIAQTGNVVGNNDGGAAPSATGNGAIAGGSGTVAEGE
GAVSFGLDNRATGNGAVAIGDPNIATGTGAVAIGANNTATGTGAVALGNASTASGASAIA
LGDGATAAGAGNVALGGGASASGANSVALGSGSVAAEANTVSVGAAGAERRLVNVAAGTA
ATDAVNKGQLDSEVAARQTMGVELGAAISAETAARQQANLQISQRLAVQEASVTALTTGL
SNEMSARIAADNALSQRIDAVSTRLDQIDSQIAILDDRISSSTAVASALSGNAFLPDMKF
NLTANVATYDGAQAGSIQMGVLLSPHVALNAGVASGFNRRGKTAARAGVTIGF
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgactattcgcgccgcgcttcgcggctcgctttgtgctgccgctttggtggcg
ggattttcgggatcggcgggggcggctgaatgcctgctcgataccaatgacgacggggtg
gtcgatgccgccgacaccgacggcggggcggtatcggatggcagcggcagcacgctggcg
tgcggggtgggcgccgatgcgacgggcaccaacaacaccgcgatcggcggcagcgcgagc
gcacccggcgatttgaacacggcggtcggctataatgcgcgggtccgggcacaggtctcg
ggcgtcgcggtgggcgccaatgcgaccgccgaaaccgattttgccgtggcggtcggcgca
ggctccgcagcgaacggcgaaggagcggtggcaatgggcgccagcgcttctgcctatgaa
caatcggtggcgatcggccagcgcgcttctgccggttcgaacgcaatcgcgatcggtagc
gctgcgtcgggctttccgcagaccgtcgcgagcgacgtcaatacgattgcgatcggcagc
ggtgcttccgcgctgtttatgcacggcgtcgcgatcggcagcagtgcgtacagcaatggg
gcagggagcgtcgcgcttggcgacgcggcgcgcgcgacgagcgattatgcactcgctctc
ggtgtcggtgcggaagcgaccgagatgaatgcgctggcaatcgggctcaacgccaccgca
tcgaattcgagcggcattgcgatcgggcgcgaagccggtagcagcggcgaactcgccgtc
gctctgggggacagtgcgggggcgagcggcggcttgtccatggcgcttggatatgaggcg
cgggccggtcactataattcggtcgcattgggaagtttttcgaccaccggcgaggataat
gtgatttcggtcggttatgtcggtggcgaacggcggatcacccatatcgcggcgggggtg
aacgacaccgacgcggtgaatctggcgcagctcaatgcggcgcttgacggcgagaacgaa
tatttcgccgtgagcgggacagagccgggcgcccaggcaaatggtcaatattctacggcg
ggcggcgaacaggctcgcgccgagagccagggggcaaccgtaattggctatcacgcacaa
tccttgtcggacgattcctccgcattcggccgggaggcctatacgaacggatatcgcgcc
gcgtcgttcggagcgttcgcgcgagcggacaataattatgccacggcgatcggcggggaa
gccatcgcacgcgatcgtcgatcgacggcgatcgggcacaatgccattgccggatcatcg
ggcctcagcggatcactgggccaggtcgccgtgggtgcaggaagtcgcgccgagaatgat
ttttcgaccgcgctcggtacggatgccgtggctttttcaagcgcttcggttgcggtcggc
ggcgaagcaaatgtcacgggcaatgctgcggtcgcggtaggatatcgcgccaatgtcacg
ggcgacaacagcgtggcgctggggaacggatcacaggcgaccagggccaacagcgtttcc
gtaggcgcgacaggcagcgagcgtcagatcgtcagtgtggcggcgggaaccgagggcacc
gacgcggtcaacctcgaccagctgaacgccgtcgggacgacggcgaacaccgcgctggcc
aatgcggcaactgcgcagggggtcgccgataccgcactcgccaacgccgccacggcgcag
tcgaccgccgatgccgcgctcgcggcggtgacgtcggcgcagggcgatgccggcgcggcg
ctggcggccgcgaacgatgcgcaggcgacggcgggcgaggcgctggcgaatgccgccacc
gcgcaatcggcggcggcttcggcgcaaggcaccgccgacaccgctatcgctaatgccgcg
acggcgcaggcttcggccgatgcggcgcaggcgaccgccgacaccgcgctcgccgatgcg
gcaaccgcgatctcgacggcgaaccaggcgaacgccacggcggaccttgcgctcgcgcgg
gtcgacgaggtgatcgcacagacgggcaatgtcgtcggcaacaacgatggcggcgcggcg
ccgagcgcgacgggcaatggcgcgattgcgggcggttcgggcacggtggccgagggcgag
ggcgcggtgtcgttcgggctcgacaaccgggcgaccggcaatggtgcggtggcgatcggc
gatccgaatatcgcgaccggtaccggtgcggtggcgatcggggcgaacaacacggcgacc
ggcaccggtgcggtggcgctgggcaatgccagcaccgcgagcggcgcttcggcgattgcg
ctgggcgatggcgcgacggcggcgggcgcaggcaatgtcgcgctcggcggcggcgcctcg
gcgagcggcgcgaacagcgtcgcgctcggcagcggttcggtggcggcggaggcgaacacc
gtctcggtcggcgcggcgggggccgaacggcgtctcgtcaatgtcgctgcggggacggcg
gcgaccgacgcggtgaacaagggccagctcgatagcgaagtcgcggcgcggcagacgatg
ggggtcgaactcggcgccgcgatcagcgccgaaaccgcggcgcgccagcaggccaatctg
cagatctcgcagcggcttgcggtgcaggaggcgtcggtcaccgcgctgaccaccgggctg
tcgaacgaaatgtcggcgcgcatcgccgccgacaatgcgctgtcgcagcggatcgacgcg
gtgtcgacgcggctcgaccagatcgattcgcagatcgcgatcctcgacgaccgtatctcg
agctcgaccgcggttgcgtcggcgctgtcgggcaacgccttcctgcccgacatgaagttc
aacctcaccgcgaacgtcgccacttacgacggcgcgcaggcggggtcgatccagatgggc
gtgctgctcagcccgcatgtcgcgctcaacgccggcgttgcgtcgggctttaaccgccgc
ggcaagaccgcggcgcgcgccggggtgacgatcggcttctga
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