Sphingopyxis sp. J-6: V6U71_21820
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Entry
V6U71_21820 CDS
T10764
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spjj Sphingopyxis sp. J-6
Brite
KEGG Orthology (KO) [BR:
spjj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjj02000
]
V6U71_21820
Transporters [BR:
spjj02000
]
Other transporters
Pores ion channels [TC:
1
]
V6U71_21820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
XMG40455
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Position
4559584..4562172
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AA seq
862 aa
AA seq
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MRLFRLALHASIATSALAAAALAVPAQAQAEDRTYRFAIPAQDMKASLRALARTSGQQIG
FDSAALQGKRAPALNGTFSVRDGVARLLAGSGLEPSWGRSGVLVIRPAPRKPGAAYQAPN
RGADAAMAGADDGEIVVTARKSNERIQDVPVSLTAVTADALRDRGAADIKDVLRSVPGLA
NYGTERGLSRYSIRGLSTYASSPTVGIYLDDISLVTVSTTFSGAYDPMFFDMERVEVLKG
PQGTLYGGSAMGGAIKYVSARPDPTRFSVDTAIGAAITDGGGPSYNGEVVVNAPIVEDKL
AVRAGFYYRHDGGFVDNRPGDIRVLLRSSTPFPDYTPVVQDSLSNRTKKNRNYGDTYVGR
LSFEWRPDESWTIRPQLFYQDYKQGDTGDMFIGRPDRSGSYRIAQPNYDRAGIYSLSVEK
ELGGVKATSLTAYFDRTFRYVRDYSFYIGGLIPALYPFTSTNVSDSFTKTFSQEVRLASD
NDSPFQWVIGGYYSSQDDRLIQAVNTPGMSAFFGTDLAYYGNIFTNTKQYAGFGEASYAL
FDGFDVTAGVRVFKVEQLVNARTDGVFAGGPNAIPDRRNKEDGINPKFGLSYKVTRDNLL
YASAAKGFRPGGINRDRIDPDLCRTDLDNLGIENAPDSFGSDNLWTYEAGTKNMFGGGKV
MLNASAYYTEWKEIQQAIGLPSCGFGFTDNVGSAEVKGFELEARVEPLRGFQIGGTAAYT
SSKITEAVPGTSAKKGDALPDVPKWMATAYAGYRTELSGLWELDVRGEYQYQGKAPYTFD
TEVPITFPGGEVDYIPNPILERKSYQVVNAFASLSRDNTTVRLYANNLFNVHPQLDTDLS
IGADRFSTIRPRTFGVELRQGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcagactagcccttcatgcttcgatcgcgacgagtgcattggccgcggcg
gcgctcgccgtgcccgcacaggcgcaggcggaagatcggacctatcgcttcgccattccg
gcgcaggatatgaaggccagcctccgcgcgttggcgcggacctcggggcagcagatcggc
ttcgacagcgcggcgttgcagggcaagcgggcgccggcgcttaacggcactttctcggtg
cgcgacggcgtggcgcggctgctcgccggctcgggtcttgagccgagctgggggcgttcg
ggcgtgctcgtcatccgccccgccccgcgcaagccgggcgccgcctatcaggcgccgaac
cggggcgcggacgcggccatggccggcgccgacgacggcgaaatcgtcgtcacggcgcgc
aagtcaaacgagcgcattcaggatgtcccggtgtcgctgaccgcggtgaccgccgacgcg
ctgcgcgatcgcggggcggcggacatcaaggacgtgctgcgcagcgttccggggctcgcc
aattacggcaccgaacgcgggctgtcgcgctacagcatccgcggcctgtcgacctatgcc
tcctcgccgacggtcggcatctatctcgacgatatctcgctggtgacggtttcgaccacc
ttcagcggcgcctatgacccgatgttcttcgacatggagcgcgtcgaggtgctgaagggg
ccgcagggtacgctctatggcggcagcgcgatgggcggcgcgatcaaatatgtcagcgca
cgtcccgatccgacgcggttcagcgtcgataccgcgatcggtgccgcgatcaccgacggc
ggcgggccgtcgtacaatggcgaagtcgtggtcaatgcgccgatcgtcgaggacaagctc
gcggtgcgcgcgggcttctattaccgccatgacggcggtttcgtcgacaaccggccgggc
gatatccgcgtcctgttgcggtcgagcacgcccttccccgattatacgccggtggtgcag
gacagcctgtcgaaccggacgaagaagaaccgcaactatggcgacacctatgtcgggcga
ttgtcgttcgaatggcgccccgacgagagctggacgatccggccgcagcttttctatcag
gattacaagcagggcgacaccggcgacatgttcatcggccgccccgaccggtcgggctcc
tatcgcatcgcccagcccaattacgaccgtgccggcatctacagcctcagcgtcgaaaag
gagctgggcggggtgaaggcgacctcgctcaccgcctatttcgaccgcaccttccgctac
gtccgcgactacagcttttacatcggcgggctgatcccggcgctatatccgttcaccagc
accaatgtgtccgacagcttcaccaagacgttcagccaggaagtgcggctggcgtcggac
aatgattcgccgttccaatgggtgatcggcggttattattcgagccaggacgaccggctg
atccaggcggtcaacaccccggggatgagcgccttcttcggtaccgatcttgcctattac
ggcaatatcttcaccaacacgaagcaatatgccggcttcggcgaggcaagctatgcgctg
ttcgacggcttcgacgtcaccgccggggtgcgcgtgttcaaggtcgaacagctcgtcaac
gcgcgcaccgacggcgtgttcgcgggcggcccgaacgccatccccgaccgccgcaacaag
gaagacgggatcaaccccaaattcggcctgtcgtacaaggtgacgcgcgacaatctcctc
tacgcctcggccgccaagggcttccgccccggcgggatcaatcgcgaccggatcgacccc
gatctctgccgcaccgatctcgataatctcggcatcgaaaacgcgcccgacagcttcgga
tcggacaatctgtggacctatgaagccgggaccaagaacatgttcggcggcggcaaggtg
atgctcaacgcttcggcctattacaccgaatggaaggagatccagcaggcgatcgggctg
ccgagctgcggcttcggcttcaccgacaatgtcggcagcgccgaggtgaagggcttcgaa
ctcgaggcgcgcgtcgaaccgctccgcgggttccagatcggcgggaccgctgcctatacc
agcagcaagatcaccgaagccgttccgggtacctcggcaaagaagggcgacgcgctgccc
gacgtgccgaagtggatggcgaccgcctatgccggttaccggaccgaattgtcggggctg
tgggaactcgatgtccgcggcgaatatcagtatcagggcaaggcgccctatacgttcgat
accgaggtgccgatcaccttcccgggcggcgaggtcgactatatcccgaacccgatcctc
gaacggaaaagctatcaggtggtcaacgccttcgcgtcgctgagccgcgacaatacgacg
gtcaggctctacgccaacaacctgttcaacgtccatccgcagctcgacaccgacctgtcg
atcggcgcggaccgtttctcgacgatccgcccgcggaccttcggcgtcgaattgcggcag
gggttctga
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