Sphingomonas sp. J315: LRS08_00535
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Entry
LRS08_00535 CDS
T11733
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
spjn Sphingomonas sp. J315
Pathway
spjn00970
Aminoacyl-tRNA biosynthesis
spjn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spjn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRS08_00535 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
spjn03029
]
LRS08_00535 (gatB)
Enzymes [BR:
spjn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
LRS08_00535 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
LRS08_00535 (gatB)
Mitochondrial biogenesis [BR:
spjn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LRS08_00535 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
PhageMin_Tail
DUF7384
Motif
Other DBs
NCBI-ProteinID:
UUX99700
LinkDB
All DBs
Position
complement(102590..104050)
Genome browser
AA seq
486 aa
AA seq
DB search
MTEAAYRIKGETGEWEVVIGLEVHAQVTSNAKLFSGAATAFGAEPNTQVSLVDAAMPGML
PVPNVECIRQAVRTGMAIDAQINKWSRFDRKNYFYADLPQGYQISQLYHPLVGEGAIEID
VDGETKVIGVERIHVEQDAGKLMHDQHPRLSYVDLNRSGVALMEIVSKPDMRSPAEAGAY
LAKLRSILRYVGSCDGNMDQGSMRADVNVSVRKPGAEFGTRTETKNVNSVRFVMQTVEIE
AKRQIEVLESGGKIVQETRLFDPDRGETRSMRSKEDAHDYRYFPDPDLLPLELDDAFLEE
CRASLPELPDAKRARYIAAGVTPYNAGVLTAEVETARYFDALLDAGAKGAAASNWVTSEL
FGALNKLGKSIEESPVSAAQAAELLGLVADGTISGSLAKQVFEIMLETGDSPGKIVEERG
LKQTSDTGAIEAVIAEVLAKNPGQLEQYRGGKEALFGFFVGQTMKAMGGKANPGVVNDLL
KKALAG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcagcataccgcatcaaaggcgaaaccggtgagtgggaggtcgtgatcggc
cttgaggtccacgcgcaggtcacgtccaacgccaagttgttttcgggcgccgcgaccgcg
ttcggggcggagccgaatacgcaggtcagcctggtcgatgcagcaatgccgggcatgctg
ccggtgcccaatgtcgagtgcatccgtcaggcggtgcgcaccggcatggcgatcgacgcg
cagatcaacaaatggtcgcgcttcgaccgcaagaactacttctacgccgatctgccacag
ggctatcagatcagccagctctaccacccgttggtgggcgagggcgcgatcgagatcgac
gtcgacggcgagaccaaggtcatcggcgtcgagcgcatccacgtcgagcaggacgccggc
aagctgatgcacgaccagcatccgcgcctgtcctatgtcgacctcaaccgcagcggcgtc
gcgctgatggaaatcgtgtcgaagcccgacatgcgctcgcccgccgaggctggggcgtat
ctcgccaagttgcgttcgatcctgcgctatgtcggctcgtgcgacggcaatatggaccag
ggctcgatgcgcgccgacgtcaacgtctctgtgcgcaagcccggcgccgaattcggcacg
cggaccgagaccaagaacgtcaattcggtccgcttcgtcatgcagacggtggagatcgag
gcgaagcgccagatcgaagtgctggagagcggcggcaagatcgtgcaggaaacccgcctg
ttcgaccccgatcgcggcgagacccggtcgatgcggtcgaaggaagacgcgcatgactat
cgctacttccccgatcccgacctgctcccgctggagctggacgatgcgtttctggaggaa
tgtcgcgcctcgctgcccgaactgcccgacgccaagcgcgcgcgctacatcgcggcgggg
gtgacgccctataatgccggcgtgctgaccgcagaggtcgaaaccgcgcgttacttcgac
gcgctgctcgatgccggcgcaaagggcgcggcggcgtcgaactgggtgacgtcggagctg
ttcggcgcgctcaacaagctgggcaagagcatcgaggaatcgccggtttcggcggcacag
gccgccgagctgctcggcctggtcgctgacggcaccatctcgggcagccttgccaagcag
gtgttcgagatcatgctcgaaaccggcgacagcccgggcaagatcgtcgaggaacgcggc
ctcaagcagaccagcgacactggcgcgatcgaggcggttatcgctgaagtgctggccaag
aaccccggccagctagagcagtatcgcggcggcaaggaggcgctgttcggcttcttcgtc
ggccagacgatgaaggcgatgggcggcaaggccaatccgggcgtggtcaatgacctgctg
aaaaaggcgctggcgggctaa
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