Sphingomonas sp. J315: LRS08_08720
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Entry
LRS08_08720 CDS
T11733
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
spjn Sphingomonas sp. J315
Pathway
spjn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spjn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRS08_08720
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spjn01007
]
LRS08_08720
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spjn03016
]
LRS08_08720
Enzymes [BR:
spjn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LRS08_08720
Amino acid related enzymes [BR:
spjn01007
]
Aminoacyl-tRNA synthetase
Class I (A)
LRS08_08720
Transfer RNA biogenesis [BR:
spjn03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LRS08_08720
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GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
DUF903
Motif
Other DBs
NCBI-ProteinID:
UUY01102
LinkDB
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Position
1726545..1728122
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AA seq
525 aa
AA seq
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MTDSILRDAALTSKAWPYEEARKLLKRYPEGKPGGAPVLFETGYGPSGLPHIGTFNEVLR
TTMVRRAFETLSDQPTRLIAFSDDMDGLRKVPDNVPNGGMLAEYIGHPLTKVPDPFGKYE
SFAAHNNAMLRDFLDRFGFDYEFASSTDYYGSGKFDDALRSVLRNYQGIMDVMLPTLRAE
RQATYSPVLPISPKTGIVLQVPIEVLDPETGMIAFTDSDGERIEQSIFGGKSKLQWKADW
AMRWVALGVDYEMSGKDLIDSVTQSGKIARVLGARPPEGFNYELFLDAKGEKISKTKGNG
LSIEQWLTYGPDESLAFYIYREPKKAKALHLGLIPRAVDDYWQFRAAYAEQPVEQRLGNP
VHHIHNGPPPAGTLPVTFGLLLNLVGVMREATREQVWGYLANYLPGASAEQWPELDALIG
YAIAYVRDVAEKPVRRAPEGVEVDALRDLDAQLAEAGADASAEDLQNIVYEIGKARFGKE
ALRDWFKALYETLLGSSQGPRMGSFIALYGVENSRKLIAEALAKA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagcattctccgcgacgccgcgctcacctccaaggcctggccctatgaagag
gcgcgcaagctgctcaagcgctatccggaggggaagcccggcggtgcgccggtgctgttc
gagaccggctatggcccgtcggggctgccgcatatcgggacgttcaacgaagtgctgcgc
accacgatggtgcggcgcgcgttcgagacgctgtccgaccagccgacgcggctgatcgcg
ttcagcgacgatatggacgggctgcgcaaggtgccggacaatgtgccgaacggtgggatg
ctggcggagtatatcggccatccgttgaccaaggtgcccgacccgttcggcaaatatgag
agctttgccgcgcacaacaatgcgatgctgcgcgatttcctcgatcgcttcgggttcgat
tacgagttcgcctcgtccaccgactattacgggtcgggcaagttcgacgatgcgctgcgc
tcggtgctgcgcaactatcagggcatcatggacgtgatgctgccgacgctgcgcgccgag
cggcaggctacctattcgcccgtgctgccgatcagcccgaagacggggatcgtgctgcag
gtgccgatcgaggtgctcgacccggagacggggatgatcgcgttcaccgacagcgatggc
gagcggatcgagcagagcatctttggcggcaagtcgaagctgcagtggaaggctgactgg
gcgatgcgctgggtcgctttgggcgtcgattacgagatgtcgggcaaggacctgatcgat
tcggtgacgcaatcgggcaagatcgcgcgcgtgctgggcgcccggccgcccgaggggttc
aactacgagctgttcctcgacgccaagggtgagaagatcagcaagaccaagggcaacggc
ctgtcgatcgagcagtggctgacctatggccccgacgagagcctcgccttctacatctat
cgcgagccgaaaaaggccaaggcgctgcatctggggctgatcccgcgcgcggtggacgat
tactggcaattccgcgccgcctatgccgagcagccggtcgagcagcggctgggcaatccg
gtgcatcatattcataacgggccgccgcccgcggggacgttgccggtgacgttcgggctg
ttgctcaatctggtcggtgtaatgcgcgaggcgaccagggagcaggtctggggctatctc
gccaactacctccccggcgcgagcgcggagcaatggcccgagctggatgcgctgatcggc
tatgcgatcgcctatgtccgcgacgtggccgagaagccggtgcggcgtgcacccgagggg
gtggaggtcgatgccttgcgcgatctggacgcccagcttgccgaggcgggggcggatgcc
tcggcggaggatctgcagaacatcgtctatgaaatcggcaaggcgcggttcggcaaggaa
gcgctgcgcgactggttcaaggcgctgtacgaaacgctgctgggcagctcgcagggaccg
cgcatggggagctttatcgcgctctatggtgtggagaacagccgcaagctgatcgccgag
gcgctggcgaaggcgtag
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