Sphingomonas sp. J315: LRS08_13365
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Entry
LRS08_13365 CDS
T11733
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
spjn Sphingomonas sp. J315
Pathway
spjn00020
Citrate cycle (TCA cycle)
spjn00640
Propanoate metabolism
spjn00660
C5-Branched dibasic acid metabolism
spjn00720
Other carbon fixation pathways
spjn01100
Metabolic pathways
spjn01110
Biosynthesis of secondary metabolites
spjn01120
Microbial metabolism in diverse environments
spjn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
spjn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRS08_13365 (sucD)
00640 Propanoate metabolism
LRS08_13365 (sucD)
00660 C5-Branched dibasic acid metabolism
LRS08_13365 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
LRS08_13365 (sucD)
Enzymes [BR:
spjn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LRS08_13365 (sucD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UUX98536
LinkDB
All DBs
Position
complement(2647440..2648324)
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AA seq
294 aa
AA seq
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MSILIDRNTKVITQGMTGETGTFHTQQALAYGTQMVGGVTPGKGGTEHIGLPVFDTVAEA
KSKTGADASVIYVPPPFAADSILEAIDAEIPLIVCITEGIPVLDMVKVKRALSGSKSRLI
GPNCPGLLTPNQCKIGIMPGNIFSEGSVGVVSRSGTLTYEAVFQTTNAGLGQTTAVGIGG
DPVNGTNFIDVLELFLADEATKSIIMIGEIGGDAEEQAAQFLIDEAKRGRKKPMAGFIAG
RTAPPGRRMGHAGAIVSGGKGDAESKIAAMEEAGIRVSQSPSLLGETLLEALKG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcatcgaccggaataccaaggtcatcacacagggtatgaccggcgagacc
ggcaccttccacacccagcaggcgctggcctatggcacgcagatggtcggcggcgtcacc
ccgggcaagggcggcaccgagcatatcggcctgccggtgttcgacaccgtcgccgaagcc
aagagcaagaccggtgccgacgcatcggtcatctacgttccgccgcccttcgccgcggac
tcgatcctcgaggcgatcgacgccgaaattccgctgatcgtctgcatcaccgagggcatt
ccggtgctcgacatggtcaaggtgaagcgcgcgctgagcggcagcaagtcgcgcctgatc
ggaccgaactgccccggcctgttgaccccgaaccagtgcaagatcggcatcatgccgggc
aacatcttctccgaaggttcggtcggcgtcgtgtcgcgttcgggcacgctgacctatgaa
gccgtgttccagaccaccaatgcgggcctgggccagaccaccgcggtcggcatcggcggc
gatccggtcaacggcaccaacttcatcgacgtgctcgaactgttcctggccgacgaagcg
accaagtcgatcatcatgatcggcgaaatcggcggcgacgccgaggagcaggccgcgcag
ttcctgatcgacgaggccaagcgcggccgcaagaagccgatggccggcttcatcgcgggc
cgcaccgcccctccgggccgtcgcatgggccatgccggcgcgatcgtgtcgggcggcaag
ggcgatgctgagagcaagatcgcggcgatggaagaagcgggcatccgcgtcagccagtcg
cccagcctgctcggcgagacgctgcttgaggcgctgaagggctga
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