Sphingomonas sp. J315: LRS08_19525
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Entry
LRS08_19525 CDS
T11733
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spjn Sphingomonas sp. J315
Pathway
spjn00220
Arginine biosynthesis
spjn00240
Pyrimidine metabolism
spjn00250
Alanine, aspartate and glutamate metabolism
spjn01100
Metabolic pathways
spjn01110
Biosynthesis of secondary metabolites
spjn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spjn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LRS08_19525 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LRS08_19525 (carB)
00220 Arginine biosynthesis
LRS08_19525 (carB)
Enzymes [BR:
spjn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LRS08_19525 (carB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
RimK
ATP-grasp_5
CoA_binding_2
MucBP_2
DUF6716
Motif
Other DBs
NCBI-ProteinID:
UUX99581
LinkDB
All DBs
Position
complement(3883634..3886966)
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AA seq
1110 aa
AA seq
DB search
MPKRTDISSILVIGAGPIVIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPEL
ADATYVEPITPAVVAKIIEKERPDAVLPTMGGQTALNTALALANDGTLEKFGVTMIGANA
EAIDKAEDRLKFRDAMDKIGLDSARSAIAHTEAEALEGLEKVGLPAIIRPSFTLGGTGGG
IAYNKEEFIDIVRKGLDASPTTEVLIEESLLGWKEYEMEVVRDRNDNCIIICSIENVDAM
GTHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEITNDITGATPASFEPTIDYVVTKIPR
FAFEKFKGAEATLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLSGFNNVEHLQGAPRD
VIEAALAQRTPDRLLIAAQALREGFTVAEVHALAAYDPWFLERIAEIVAAEEEVCRGGLP
QDAAGMRRLKSMGFSDKRLAWLALRSANLREGTDAMARSSGLIGDVVKAMTGGVTEADVR
KLRHKLNVRPVFKRIDTCAAEFDAKTPYMYSTYEAPSFGEPECESMPTSAKKVVILGGGP
NRIGQGIEFDYCCCHACFALADAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LHVEMSQGTLAGVIVQFGGQTPLNLARALESAGIPILGTSPDAIDLAEDREQFADLVSKL
GLKQPKNGIARSREEAIAVAERIGYPVLTRPSFVLGGRAMEIVDTVEQLDHYIQTAVQVS
GDAPVLIDQYLRDAIEVDVDAISDGDDVVVAGVLQHIEEAGVHSGDSACSLPPYSLPDAI
VAEIERQTDALARALKVQGLMNIQFAVKDGEVYLIEVNPRASRTVPFVAKAIGIPIAKIA
SRVMAGEKLKDLPKIDRNIDYVAVKEAVFPWGRFPGVDPVLSPEMKSTGEVMGIDRDFPI
AFAKAQLGASTVLPSGGAVFVSVKDGDKPVVLPGVRLLVEQGFTIVATGGTAEYLAAQGV
PVERVNKVAQGRPHIVDRIRDGDIALIFNTTEGWQSLKDSESIRASALSLKVPYFTTAPA
SVAASQAIAALSGQSLEVRPLQAYYSQSHN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgacatctcctccatcctcgtcattggcgctggtcccatcgtgatc
ggtcaggcgtgcgagttcgactattcgggcacgcaggcgatcaaggcgctcaaggaagag
ggctatcgcatcgtcctggtcaattcgaacccggcgacgatcatgaccgatcccgagctg
gctgacgcgacctatgtcgagccgatcacgcccgcggtggtcgccaagatcattgagaag
gagcggcccgatgcggtgctgccgacgatgggcgggcagaccgcgctgaatactgcgctg
gcgctggcgaacgatggcacgctggagaagttcggcgtcaccatgatcggcgcgaatgcc
gaggcgatcgacaaggccgaggatcggctgaaattccgcgacgcgatggacaaaatcggg
ctcgacagcgcgcgttcggcgattgcgcacaccgaggcggaggcgctggaggggctggag
aaggtcgggctgccggcgatcatccgtccgtcctttacgctgggcgggaccggcggcggc
attgcctataacaaggaagagttcatcgacatcgtccgcaaggggctggacgcatcgccg
acgaccgaggtgctgatcgaggagtcgctgctcggttggaaggaatatgagatggaggtc
gtgcgggatcgcaacgacaactgcatcatcatctgttcgatcgagaatgtcgatgcgatg
ggcacccatacgggtgactcgatcacggtcgcgcccgcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgccagcatcgcggtgctgcgcgagatcggcgtggagaccggc
gggtcgaacgtgcagttcgcggtgaacccgaaggacgggcgcctgatcgtgatcgagatg
aacccgcgcgtgtcgcggtcctcggcgctggcgtcaaaggcaacgggctttccgattgcc
aaggtcgcggcgaagctggcggtcggatacacgctggacgagatcaccaacgacattacc
ggcgcgaccccggcgagcttcgagccgacgatcgactatgtcgtgaccaagatcccacgc
tttgcgttcgagaagttcaagggcgcggaagcgacgctgggcaccgcaatgaagtcggtc
ggcgaggtgatggcgatcggccgcaacatccatgaatcgatgcagaaggcgctgcgcggg
ctggagaccggcctgtcgggcttcaacaatgtcgagcatctgcagggtgcgccgcgcgac
gtgatcgaggcggcattggcgcagcgcacgcccgaccggctgctgatcgcggcacaggcg
ctgcgtgaggggttcacggtggccgaggtgcatgcgctcgcggcatacgacccgtggttc
ctggagcggattgccgagatcgtcgcggcggaggaagaggtgtgccggggtggcctgccg
caggatgcggcggggatgcggcggctcaagtcgatgggcttcagcgacaagcggctggcg
tggctggcgctccgctcggcgaatctgcgcgagggcaccgacgcgatggcgcgctcgtcg
ggcctgatcggggacgtcgtcaaggcgatgaccggcggggtgaccgaggcggacgtgcgc
aagctgcgccacaagctgaacgtgcgcccggtgttcaagcggatcgacacctgcgccgcc
gagttcgacgcgaagacgccgtatatgtattcgacatatgaggccccgtcctttggcgag
cccgagtgcgagagcatgccgacgtccgccaagaaggtcgtgatcctgggcggcgggccg
aaccggatcgggcaggggatcgagttcgattattgctgctgccacgcctgcttcgcgctg
gcggatgcgggctatgagacgatcatggtcaactgcaacccggaaacggtgagcaccgat
tatgacacgtcggatcgcctttatttcgagccgctgacggcggaggatgtgctggaaatc
ctgcacgtcgaaatgtcgcaggggacgctggcgggggtgatcgtccagtttggcgggcag
acgccgctcaacctggcgcgcgcgcttgagagtgcgggcatcccgatcctgggcaccagc
cccgacgccatcgacctggccgaggatcgcgagcagttcgccgacctggtgtcgaagctg
gggctcaagcagccgaagaacggcatcgcgcgcagccgcgaagaggcgatcgcggtggcc
gagcggatcggctatccggtactgacgcgcccgagcttcgtgctgggtggtcgggcgatg
gagatcgtcgatacggtcgagcagctcgatcactatatccagaccgcggttcaggtgtcg
ggcgatgccccggtgctgatcgaccagtatctgcgcgacgcgatcgaggtcgatgtcgat
gcgatcagcgatggcgacgatgtggtcgttgcgggcgtgctgcagcatatcgaggaagcc
ggtgtccattcgggcgacagcgcctgctcgctgccgccctatagcctgcccgacgcgatc
gttgccgaaatcgagcgccagaccgacgcgctggcacgcgcgctcaaggtccaggggctg
atgaacatccagttcgcggtcaaggacggcgaggtctacctgatcgaggtgaacccgcgc
gcgtcgcgcaccgtgccgttcgtcgccaaggcgatcgggattcccatcgcgaagatcgcg
agccgggtgatggcgggcgagaagctgaaggatctgcccaagatcgaccggaacatcgac
tatgttgcggtgaaggaagccgtctttccttggggccgcttccccggcgtcgatccggtg
ctgtcgccggaaatgaagtcgaccggcgaagtgatggggatcgaccgcgatttcccgatc
gctttcgccaaggcacagctgggtgccagcacggtgctgccgagcggcggcgcggtattc
gtcagcgtcaaggacggcgacaagccggtggtgctcccgggggtgcggctgctggtcgaa
cagggctttaccatcgtcgcgaccggcgggacggcggagtatctcgcggcgcagggcgtg
ccggtcgagcgggtcaacaaggtcgcgcagggtcggccgcacatcgtggaccggatccgc
gacggcgatatcgcgctgatcttcaacaccaccgaggggtggcagagcctgaaggacagc
gaatcgatccgcgcatcggcgctgtcgctgaaggtcccgtacttcaccacggcccccgcc
agcgtcgccgcatcacaggcgattgccgccttgagtggccagtcccttgaagtccgcccc
ttgcaggcttactattcgcaatcgcacaattga
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integrated database retrieval system
