Sphingobium sp. JS3065: NUH86_00620
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Entry
NUH86_00620 CDS
T10812
Name
(GenBank) contractile injection system protein, VgrG/Pvc8 family
KO
K06905
Bacteriophage probable baseplate hub protein
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
NUH86_00620
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
E217_GP41
Motif
Other DBs
NCBI-ProteinID:
UZW55350
LinkDB
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Position
1:complement(129877..130902)
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AA seq
341 aa
AA seq
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MSEPAAARKMPFAAWRVTLDGKDLTEAMAPRLISLSLSEKRGDEADLLDIVIHDADGLLE
IPKSGAVLRVALGWKQGSGLPVGLVDKGSFKVDEASFSGPPDLVTVRARSADLTDSFRVR
KERSFVGKTVKDIVTAIAGDNGLKPQIDAGLGAKVIPALGTGAKSDAALLRLLGKRFDAV
ATVKAGALIFAPIGKGMTTKGTALPVETLNRSASERLEYSRVERDQHDGVEASWHDKATG
ERKAVKSGHKGKGKAKRLRKTYASETDARHAADAENGRITRAKAKCTFTLAYGRPDIFPE
RPIELEGVKAEIAGHSWIVADCTHNMDGQGALKTTLNLEAI
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccgcagccgccaggaaaatgcccttcgccgcgtggcgcgtgacgctcgac
ggcaaggatttgaccgaggccatggccccgcgcctgatttcgctcagcctcagcgaaaag
cggggcgatgaggccgatctgctcgacatcgtcatacacgatgcggacggcctgctggaa
atcccaaaatccggcgcggtcctgcgcgtggcgctgggctggaaacaggggagcggcctt
ccggtcggcttggtcgacaagggcagcttcaaggtggacgaagccagcttttccggcccg
cccgatctggtgacggtgcgcgcccgctccgccgacctgaccgatagcttccgggtccgc
aaggaacgcagcttcgtgggcaagacggtgaaggacatcgtcaccgccatcgcgggggac
aatggcctgaaaccccagatcgacgccgggctgggggcgaaggtcattcctgcgctgggc
acgggcgcgaaaagcgatgccgccttgctccgcctgctgggcaagcggttcgacgcggtg
gccaccgtcaaggccggggcgctgatcttcgcgccgatcggcaagggcatgaccaccaag
ggcaccgccctgcccgtcgaaaccctcaatcgcagcgccagcgaaaggctggaatatagc
cgcgtcgaacgcgaccagcatgacggcgtggaggcgtcatggcacgacaaggcgaccggc
gagcgcaaggccgtgaaatccggccacaagggcaaggggaaggccaagcgcctgcgcaag
acctatgccagcgaaaccgacgcgcgccatgcggcggatgcggagaacggacgtatcacc
cgcgccaaggcgaaatgcaccttcaccttggcctatgggcggcccgacatctttcccgaa
cggccgatagagctggaaggcgtcaaggcggagatcgcggggcatagctggatcgtcgcg
gactgcacccataatatggacggtcagggcgcgctcaagaccacgctcaatctggaagct
atttag
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