Sphingobium sp. JS3065: NUH86_02760
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Entry
NUH86_02760 CDS
T10812
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spjs03016
]
NUH86_02760 (truB)
Enzymes [BR:
spjs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NUH86_02760 (truB)
Transfer RNA biogenesis [BR:
spjs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NUH86_02760 (truB)
Prokaryotic type
NUH86_02760 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UZW55742
LinkDB
All DBs
Position
1:564015..564965
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AA seq
316 aa
AA seq
DB search
MHGWIILDKPLGLGSTQAVSAVKRALRQSGAGKWKVGHGGTLDPLATGVLPVAVGEATKL
AGRMLDSDKIYDFTIGFGVQTDTLDLEGKEIAASGHRPTLADVEGVLPRFTGPIEQAPPA
YSAILIDGQRAYDLARAGQDVEMKTRAITIHNLAISSPQRGEDSTACPQSGLAKLGEEAA
AEKINEITLTAHVSKGTYIRSLARDIALALGTVGHVTMLRRVKAGPFTLETAISLDKLDE
AARGGGIAQLMLPLTAGLDDIPALAVSPDDALALRQGKVLVGKPHTGLMLAMEGDTPVAL
VEASGPEIRVVRGFNL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcacggttggatcatcctcgacaagcccttggggctaggctccacccaggcggtgagc
gcggtgaagcgcgccctgcggcaaagcggcgcgggcaagtggaaggtcggccatggcggc
acgctcgatccgctggcgaccggcgtgctgccggtggcggtgggggaggcgaccaagctg
gccgggcggatgctggacagcgacaagatatacgatttcaccataggcttcggcgtccag
accgacacgctggacctggagggcaaggaaatcgccgccagcggccatcgccccacgctg
gcggatgtggagggggtgttgccacgcttcaccggcccgatcgaacaggccccaccggcc
tattccgccatcctgatcgacggccagcgcgcctacgacctggcgcgtgccgggcaggac
gtggaaatgaagacccgcgccatcaccatccacaacctcgccatctcctcgccccaacgg
ggagaggatagcacagcttgcccgcaaagcgggctagcgaagcttggagaggaggctgcc
gcagagaagatcaacgaaatcaccctcaccgcccatgtctccaagggcacctatatccgc
tccctggcccgcgacatcgcgctggcccttggcacggtcggccatgtcaccatgcttcgc
cgcgtgaaggcaggcccgttcaccctggaaaccgcgatttcgctggacaaattggacgaa
gctgctaggggcggcggcatcgcgcagcttatgctgccgttgaccgcagggctggacgac
atcccggctctcgcagtctctcccgacgatgcgctggctctccgacaggggaaggtgctc
gtggggaaaccgcataccggtctcatgctggcgatggagggcgatacgcccgtcgcgctg
gtggaggccagtggcccggaaatccgggtggtgcgcggctttaatctctaa
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integrated database retrieval system
