Sphingobium sp. JS3065: NUH86_05635
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Entry
NUH86_05635 CDS
T10812
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_05635
Enzymes [BR:
spjs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NUH86_05635
DNA repair and recombination proteins [BR:
spjs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NUH86_05635
Prokaryotic type
NUH86_05635
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZW56262
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All DBs
Position
1:1153284..1154660
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AA seq
458 aa
AA seq
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MPNPVIVWLRQDLRLADQAALAAAVREGPVIPVYVLDDGVPRQWKMGGASRWWLHHSLTS
LDANLREKGSRLILRQGDCIDQLVHIAEETGARRIHALHHYEPWWRNAEKALAKRLDLCL
HDGGLLLPPGAVRTGGGSYYRIYTPFARAVMERMPPPAPVPAPSGIDAPSQWPKSDSLDD
WRLLPTKPDWAAAFSRDWTPGEAGARANVEAFLDEAADYDRARNLPSQEGSSRLSPHLHF
GEVSPAYVWHKVAGAPGDATTFLKELIWRDYAHSQIWAMPTYGSENARKAFDAMPWRDLG
EAGSDFEAWKIGRTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLIDWRHGARWFW
DTLVDASYANNSVNWQWVAGSGVDANIFSRIMAPLTQSEKFDAANYIRTWVPELAHLDDD
HIHDPDSHGMRPPDYPAKCIGHREGRERALAAWSHGKP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatcccgttatcgtttggctccgacaggatttgcgccttgccgatcaggccgcg
ctggccgccgccgtgcgggaagggccagtaattcccgtctatgtgctggacgatggggtg
ccccgccagtggaaaatgggcggggcttcgcgctggtggctgcatcacagcctaacgagc
ctggatgcgaatctgcgggaaaagggttcccgcctgatcctgcggcaaggcgactgcatc
gaccagcttgtccatattgccgaggaaacgggcgcccggcgcattcatgcgctgcaccat
tatgaaccctggtggcgcaatgcggaaaaggcgctcgccaaacggctggacctttgcctg
catgacggcgggttgctgctgccgccgggcgcggtgaggactggcgggggaagctactat
cggatttacacgccctttgcgcgcgcggtgatggagcggatgccgccgcccgcgccggtc
ccggcaccctcaggcatcgacgcgccttcgcaatggccgaaaagcgattcgctagacgat
tggcggcttttgccgacgaagccggattgggcagcggccttttcccgcgactggaccccc
ggcgaagcgggagcgcgggccaatgtcgaggcgtttctggacgaggctgcggattatgac
agggcgcgtaacctgccatcgcaggagggaagttcccgtctctcgccccatcttcatttc
ggggaagtctcgcccgcctatgtctggcacaaggttgccggagcacccggggacgcgacg
actttcctcaaggaactgatctggcgcgattatgcgcacagtcagatctgggcgatgccc
acttatggttcggaaaatgcccggaaagcgttcgacgccatgccctggcgcgatcttggg
gaggctgggagcgatttcgaggcctggaaaatcgggcgcaccggctatcctatcgtcgat
gcgggcatgcgccagctctgggcgaccggctggatgcacaatcgcgtccgcatgatcgcg
gcgagcttcctgatcaagcatctgctgatcgactggcggcacggggcgcgctggttctgg
gatacgctggtcgacgcaagctacgccaacaacagtgtcaactggcaatgggttgcgggc
agcggtgtcgacgccaatatcttctcccgcatcatggcgcccctgacccagtcggaaaaa
ttcgatgccgccaactatatcaggacatgggtgccggaactggcgcatctggacgatgat
catatccacgaccccgattcccacggcatgcgcccgcccgactatccggccaagtgcatc
ggccatcgggaggggcgggaaagggctctcgccgcctggagccatgggaagccatga
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