Sphingobium sp. JS3065: NUH86_05775
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Entry
NUH86_05775 CDS
T10812
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spjs03009
]
NUH86_05775
Enzymes [BR:
spjs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NUH86_05775
Ribosome biogenesis [BR:
spjs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NUH86_05775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
fvmRadSAM-pep
MTS
Motif
Other DBs
NCBI-ProteinID:
UZW56288
LinkDB
All DBs
Position
1:1185314..1186528
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AA seq
404 aa
AA seq
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MTDPDTDIIIRIAAKGDGVTANGRHVPLTAPGDRIAADGGILPGPHHVDPPCVHFPTCGG
CELQHIDDASYADFVTARVTGALAGQGVEPGTLLPPHISPRKARRRASLRASRQGRKVVI
GFAESGSHMLVDLTMCEILDPTLFALLAPLRALCGVILPDKRAVHVRMSLTDQGVDLLLE
GFRIDGLAADEALLAFAREQVLARLTIDEGDGPQTRWEPEPVTVSFGGVPVAFPPFAFLQ
ATPDGEAALVGEARQAMPAEGAIADLFCGLGTFALAVGSKQPVYAAEAARDLVLSLKSAA
NRTGRRMVVDHRDLFRRPLTPAEIDRFAGIVIDPPRAGAREQVMQLAASNVPVIAYVSCN
PASFARDAAHLIGGGYRLESVRPVGQFRWSTHVELVGIFRRGQG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatccagacaccgacatcatcatccgcatcgccgccaagggcgatggcgtgacc
gccaatggccgtcatgttcctttgacagcgccgggcgaccggatcgcggcggacggcggc
attttgccggggccgcatcatgtcgatccgccttgcgtccattttccgacctgcggcgga
tgcgaacttcagcatatcgacgatgccagctatgcggatttcgtgacagcgcgcgtcacc
ggagccctggcggggcagggtgtggagccgggcacgctcctgccgccgcatatctcgccg
cgaaaggcgcgccgccgcgcttccctgagagccagcaggcaggggcggaaggtcgtcatc
ggttttgcggaatccggcagccatatgctggtcgacctgacgatgtgtgaaattctcgac
ccgacgctgttcgctttgctggcgccgctcagggcattgtgcggcgtcatcctgcccgac
aagcgcgccgtgcatgtccgcatgtcgttgaccgaccagggcgtggacctgctgctggaa
ggatttcggatcgacggactcgccgccgatgaagcgttgctggcctttgcgcgagaacag
gtgttggcccggctgaccatcgatgaaggtgacgggccgcagacccggtgggagccggaa
cccgtcaccgtcagcttcggcggcgtgccggtcgctttcccgcccttcgcctttctccag
gcgactccggacggcgaagcagcgttggttggcgaagcgcgacaggccatgcctgccgag
ggcgccatcgccgatcttttctgcggactgggcactttcgcgctagccgtgggatcgaaa
cagccggtctatgcggcggaggcggcgcgcgatcttgtcctctccctgaaatcggcggcg
aaccgcacggggcggcggatggtcgtggatcatcgggatctgttcagacgccctctgacg
cctgcggagatcgatcgcttcgccggcatcgtcatcgatccgccacgtgctggcgccagg
gagcaggtgatgcaacttgcagcgtcgaacgtgccggtcatcgcctatgtctcctgcaat
ccagctagtttcgcgcgcgatgccgcccatctgatcggaggaggctatcggctggaaagc
gtgcggccggtggggcagttccgctggtcgacccatgtcgagctggtcggaattttccgg
cgcggacaaggttag
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