Sphingobium sp. JS3065: NUH86_06020
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Entry
NUH86_06020 CDS
T10812
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spjs Sphingobium sp. JS3065
Brite
Enzymes [BR:
spjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NUH86_06020 (addB)
DNA repair and recombination proteins [BR:
spjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NUH86_06020 (addB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UZW56332
LinkDB
All DBs
Position
1:1242837..1245812
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AA seq
991 aa
AA seq
DB search
MGDRTRPALFNIPAHRAFSDALVAGILAQHGGDPMRLAQGMILLPNNRAIRSVSDAFVRK
SGGGLLLPRLIALGDPDLGEQVGGALDPLGEDEVVPPAIAPMRRQMILARMVQQASAHPM
DAGQALKLAQALGAVLDQIQVERLSVAALADLTLSDELSQHWQTSLSLFGILLAQWPQEL
ARLGCIDLADRRNRLLDRVAARWAKAPPEGFVIAAGMSMTAPAIAALLRRIAVLPKGAVV
FAGLDQEMDGDAWDAIGPFDADPVTGRAPAGHETHPQYALKRLLDRMSATRDDVALWRWG
SEHDARAVRGRNISNAMLPPRLTSRWRDLKTADRSLAGVEALEVATPGEEAQAIAIALRE
AVETPGRTAALVTPDRQLATRVSAHLRRWGIEADDSAGQPLSRLPPGTLLIAMAEALAER
FAPVALLTLLKHPLVMRGEERLGWLEGVRGLDLLLRGPRPQAGIVGIDLLLAEREGEDRQ
RILRTRTRLWWADARPLLEPLEQAFLAAPDLAAQLAAIREHAGRLSHDAVWAGHQGHAAA
DLFAEMEEAASEGPRQADMRALPALFDHLLGGVSVRPPQGGHPRISILGLIEARLVQTDL
MILGGLNEGTWPGLPAPDPWLAPRIRREIGLPGLESRIGLAAHDFASALGAPQVLITRAR
RGSGGPAVASRFWLRLKAMAGPQWKSADRYAALAQAIDHAADHRPASRPAPVPPLSVRPK
VIPVTDVDRLKADPYAFYAKRILRLARLDPVDADAGPAWRGTAVHEILQQWAEAGSGDLA
DLEARARAMFDRPDVHPLLKALWQPRLIEAIRWIAAEVASDLAAGRKILSVEIEGRAEIA
GVTLTGKADRIDLLPDGKLGIVDYKTGKPPSARQVKAGYALQLGLLGLIAEHGGFPGTDA
APVAGNFEYWSLAKKGDAFGYRESPVDPMGKRDKIITADFTSQVYAQFEDIAAAYLLGPA
PFDAQVNPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccgcacccgccccgcactgttcaacatcccggcgcatcgcgccttttccgac
gcgctggtagccggcatcctcgcccagcatggcggcgatccgatgcggttggcgcagggc
atgatcctgctgcccaataatcgcgccatccggtcggtcagcgacgctttcgtgcggaag
tcggggggcggactgctgttgccgcgcctgatcgccttgggtgatccggacctgggtgaa
caggtcggcggcgcgctcgatccattgggcgaggatgaggttgtgccgcccgccatagcg
ccgatgcgccgccagatgatcctggcgcggatggtgcagcaggcttcggcgcatccgatg
gacgcggggcaggcgctgaagctcgctcaggcgcttggcgcggtcctcgaccagattcag
gtcgagcggctttcggtcgccgcgctggccgatctgaccttatcggacgaattgtcgcag
cattggcagacatcgctcagcctgttcggcatattgctggcgcaatggccgcaggagctg
gcgcggcttggctgtatcgatctggcggaccgccgcaatcggttgctggaccgggtggcg
gcgcgctgggccaaggcgccgccggagggtttcgtcattgcggcgggcatgtcgatgacg
gctccggcgattgccgcgctgttgcggcggatcgcggtgctgcccaagggggccgtcgtc
ttcgccggtctggatcaggagatggatggcgacgcctgggacgccatcggtcctttcgat
gccgatcccgtcaccggccgcgcgcctgccgggcatgaaacccatccgcaatatgcgctg
aagcgcctgctcgaccggatgagcgcgacacgcgacgatgtggcgctctggcgctggggc
agcgagcatgacgcccgcgccgtcaggggacgcaacatctccaacgccatgctgccgccg
cgcctgaccagccgctggcgcgacctcaagaccgccgaccgatcgctcgcgggggtggag
gcgctggaggtggcgacccccggagaggaggcgcaggccatcgccatcgccctgcgcgaa
gcggtagagacgccgggccgcaccgctgccctggtgacgccggaccggcaattggcgacc
cgcgtgtccgcgcatctgcggcgctggggcatagaggccgacgattccgccggtcagccg
ctttcccgcctgccgcccggaaccctgctgatcgccatggcggaggctttggcggagcgg
ttcgcgccggttgcgctgctgaccctgctcaaacatccgctggtcatgcggggggaggag
cggcttggctggctggagggcgtgcgcgggcttgacctgttgctgcgcgggccaaggccg
caggcggggatcgtcggcatcgacctgctgctggccgagcgcgagggggaagaccggcaa
cgcatcctgcgcacccgcacgcggctgtggtgggcggatgcgcgacccctgctggaaccg
ttggagcaggcctttctggccgcgcccgaccttgcggcgcaattggcggccattcgcgaa
catgccgggcgcctgtcgcacgatgcggtctgggccgggcatcaggggcacgccgccgcc
gacctcttcgcggagatggaggaagccgccagcgaagggccgcgccaggcggacatgcgc
gctttgccagcgttgttcgaccatcttctgggcggcgtgtcggtccgtccgccgcagggt
gggcatccccgcatcagcatcctcggccttatcgaggcgcggctggtgcagaccgacctg
atgatcctgggcggcctcaacgagggcacatggccggggctgcccgcgcccgacccctgg
ctggccccgcgcatccggcgggagatcggcctgccggggctggaaagccgcatcggcctg
gccgcgcatgatttcgccagcgcattgggtgcgccgcaagtgcttatcacgcgggcaagg
cggggatcgggtgggccggcggtcgcctcgcgcttctggctgcggctgaaggccatggct
gggccgcagtggaagagcgccgaccgctatgccgcgctggcgcaggccatcgatcatgcg
gcggaccaccggcccgccagccgccccgcgccggtgccgccgctgtcggtgcgcccgaag
gtcattcccgttaccgatgtcgaccggctgaaggccgacccctacgccttctacgccaag
cgcatcctgcgtctggcgcggctcgatccggtggacgccgatgccgggccagcctggcgc
ggtacggcagtgcatgaaatcctgcaacaatgggctgaggcgggcagcggcgacctggcc
gatctggaagcccgcgcgagggcgatgttcgaccggccggacgttcatcccctgctgaag
gcgctctggcaaccgcgtctcatcgaagccatccgctggatcgccgccgaggtggcgagc
gaccttgcggcggggcggaagatcctttccgtcgagatcgaggggcgggcggagatcgcc
ggggtcacgctgaccggcaaggccgaccgcatcgacctgctgccggacgggaagctgggc
atcgtcgactacaagaccggcaagcctcctagcgcccggcaggtcaaggcgggctatgcg
ctgcaactcggcctgctggggctgatcgcagagcatggcggctttcccggcacggatgcc
gctccggtggcggggaatttcgaatattggtcgctcgccaagaagggcgacgccttcggc
tatcgcgaaagtccggtcgatcccatgggcaagcgggacaagatcatcaccgccgacttc
acatcgcaggtctatgcccagttcgaggatatcgccgccgcttatctcctcggcccggcg
cccttcgatgcgcaggtgaaccccgaagtcgccaattatggcgattatgaccagctcatg
cggctggaggaatggtatgggcgcgacgatggctag
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