Sphingobium sp. JS3065: NUH86_06085
Help
Entry
NUH86_06085 CDS
T10812
Name
(GenBank) AAA family ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs03030
DNA replication
spjs03430
Mismatch repair
spjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NUH86_06085
03430 Mismatch repair
NUH86_06085
03440 Homologous recombination
NUH86_06085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjs03032
]
NUH86_06085
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_06085
Enzymes [BR:
spjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NUH86_06085
DNA replication proteins [BR:
spjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NUH86_06085
DNA repair and recombination proteins [BR:
spjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NUH86_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
nSTAND1
DUF7125
DNA_pol3_delta
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
UZW56344
LinkDB
All DBs
Position
1:1259538..1260500
Genome browser
AA seq
320 aa
AA seq
DB search
MTSLLGHDEQARTLLGAARSGRLHHGWILTGPWGIGKASFARAIALRLLAEAAGPPVSGE
GLDVPQDHPIRRLFEAEAHPDYADLYCLEKESGTARNITVDQIRSLQRLIQSAPSMSSRR
IVVIDSADDLERGAANALLKNLEEPPADMLFLLVSHAPGRLLPTIRSRCRTLRFDALSDD
AMRTILRTADEALPAKELDALIHAGEGSPGKALRYAGLNIADIEQSLAAIAADGDPGNRK
RLILSKALASKAARPRYEAFLERAPAFIAEAARQRRGSDLGKALGHWEAARQLAGGAIIL
SLEPGAVVFELAGHVAALAR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacttctcggccatgacgaacaagcgcgcacattgctgggcgcggcgcggagc
ggccgtctgcatcatggctggatattgaccgggccttggggcatcggcaaggccagcttc
gcccgcgccatcgcgctgcgcctgctggccgaagccgccgggccgccggtttcgggcgaa
gggctggacgtgccgcaggatcacccgatccgccgcctgttcgaagccgaagcgcatccc
gactatgccgacctctattgcctggaaaaggaaagcggcacggcgcgcaacatcacggtc
gaccagatccgcagcctccagcggctgatccaatcggctccttccatgtcctcccgccgg
atcgtggtgatcgacagcgccgacgatctggagcgcggggccgccaacgcgctgctcaag
aatctggaagagccgcccgccgacatgcttttcctgctggtcagccatgcgcccggccgc
ctgctgccgaccatccgttcccgctgccgcacgctgcgcttcgacgcgctgagcgacgat
gccatgcggaccatattgcgtactgcggacgaagcgctgccggcgaaggagttggacgcc
ctgatccacgcgggggagggttcacccggcaaggcgttgcgctatgcgggcctgaacatc
gcggatatcgaacagtcgcttgccgccatcgcggctgacggcgaccccggcaaccgtaaa
cgcctgatcctgtccaaggcgctggcgtcgaaggctgcccggccccgttatgaagccttt
ctcgaacgcgcgcctgccttcattgcggaggcggcgcggcagcggcggggaagcgatctt
ggcaaggcgctcggccattgggaggccgctcgccagcttgccggcggcgccatcatcctg
tcgctggaaccgggcgcggtggtgttcgaactggccgggcatgtcgcggcgctggcgcgc
tga
DBGET
integrated database retrieval system
