Sphingobium sp. JS3065: NUH86_06640
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Entry
NUH86_06640 CDS
T10812
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjs02000
]
NUH86_06640
Transporters [BR:
spjs02000
]
Other transporters
Pores ion channels [TC:
1
]
NUH86_06640
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UZW56443
LinkDB
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Position
1:complement(1388223..1390469)
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AA seq
748 aa
AA seq
DB search
MRQQFILGALLGSCSALAGTVPGYAQVATGEKDSTSPLAQAAEPAGADIVITAQRRSERL
QDVPIAVSALSGDALKSMGVNKPQDIFRQMPSITFQAPAGAAGFPIFVVRGVAMLDLSYT
SESSVATYRDDVYQGNNALAATPVFDLERVEVLRGPQGTLWGRNATGGLINFISAKPTQE
FAAGATVQYGNYDDVVLEGYVSGPLSDTVRARLAGRFNSNNGYQTDVVNGLRLGTTDHAV
DLRGILAFDPTDALSITLSAHFTDASGRNDGGAFKGTRQPGNPAASCALDQVLANQCVNS
LGYRNPTFTRSLAYSGEDLSFSRHGWGASGHIELDLGGVTLTSITAYETIRKFEGFDADR
APIGQSAGRFLQVFDIDHEQISQEIRLSGKSDKLKWQVGGFYYHDKRFYTSSLPFIPAGN
WADQSITSYSVFAQGTYALTDTFNLTAGARYTKDKKDILLAGVSAGSVPGTRLGTRTFLL
DSGTAPDAITWRLGADYHVAQDVMFFATASTGYKVGGFNATGQFSAATAGPVAPEKITAY
ELGVKSSWLDRRLTANLTIYHTIWDKIQAAATVPIPGTNTIGVVYTNIGKAKIDGLEAEI
AFRPIDELSFNAGLSLNHNKVRAPGVIIGGRPIDGNVLANTPKTSIFGGFNWEPRLANDS
RLIFGANASYQSRKNFRPDNSPFTYQPAYTLVDARAGWADASDRYRVEVFAKNLFDKKYF
ESGAPFGDEAIYAWGMPRTYGVRVTSKF
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagcaatttattcttggagcgcttctaggctcttgttccgcgcttgccgggact
gtcccaggatatgctcaggtggcgacaggcgaaaaagacagtacgagcccgctggcgcaa
gctgcagagcctgctggagctgatatcgtaataactgcccagcgccgctcggaaaggctt
caggatgtgccaattgcggtctctgcgttgagcggcgacgccctgaaaagcatgggcgta
aacaagcctcaagatatattccgtcagatgccaagtattacttttcaagcgccagcgggc
gcggctggttttcctatcttcgtcgtccgcggcgtggccatgttggacctgagctatact
agtgagtcttcggtcgcaacgtatcgcgatgacgtttatcaaggaaataacgcgcttgca
gccacgccagtcttcgatctggagcgggttgaagtcttacgtggcccccaaggcactttg
tgggggcgtaatgcgaccggtggattgatcaatttcatatcggcaaaaccaacgcaggag
ttcgccgccggtgcgacggtgcaatacggcaactatgatgacgtggtcttggaaggttat
gtttccggccccctcagcgataccgttcgagcgcgcctggccggtcgctttaattcgaac
aacggataccagactgatgtcgtaaatggtcttcgtctggggaccacggatcacgcggtt
gaccttcgtggcattctggctttcgatccgactgacgcattaagcatcacgctgtctgcg
catttcacagatgcgtcgggtcggaacgatggtggggcattcaaaggtacgcggcaacca
ggaaatcctgctgcttcctgtgcccttgatcaggtgctggccaatcaatgtgtcaacagt
cttggatatcgtaacccaactttcacccggagcttagcttattctggcgaggatcttagc
ttttcccggcatggttggggtgcaagcggccatatcgaactggatcttggaggggtgacg
ctaacgtcgattaccgcttatgaaacgatccggaaatttgagggctttgatgctgatcgc
gctcctataggccagtcagcaggacgatttttacaagttttcgacattgaccatgaacag
attagccaagaaattcgcttaagtggaaaaagtgataaattgaagtggcaagtcggaggt
ttttactatcacgataagcgattttacacctcgagtttgccattcatacctgcaggtaac
tgggccgatcagtctataacaagctactctgtgtttgctcagggcacttatgctctcacc
gacacattcaatctgactgctggcgcgcggtataccaaggataaaaaggatatcctgctg
gctggtgtctctgctgggagcgttccgggaactcggttgggcacaagaacattcctgctc
gattctgggacagcgccggatgctatcacttggcggctaggggcagattatcacgtagcg
caagatgtcatgttttttgcaacagcttcgaccgggtataaagtcggcggctttaatgcg
acggggcaattttcggctgcgaccgcaggacctgtggcgcctgaaaagatcaccgcctat
gaacttggtgtcaaatccagttggctagaccggcgtcttaccgctaatttgacaatatac
catactatttgggataaaattcaagctgctgccaccgttcctattccagggacgaacacc
atcggcgtggtgtacaccaacataggtaaagcgaagatcgacggactggaggccgaaatt
gctttccgtccaatcgatgagctctcatttaatgcgggtctatcgttaaatcataataag
gttcgggcaccgggggtcattatcggtggacggccgattgatggcaacgtcctagctaat
acgcccaaaacctccattttcgggggtttcaattgggagccgcggcttgcaaatgacagt
aggctgatttttggcgctaacgcgagttatcaaagtcgcaaaaacttccgtccggacaat
tcgccgtttacctatcaaccagcttatacactcgtcgatgctcgtgccggatgggccgac
gcaagtgatcgctatcgggtggaggtctttgcgaagaacttgtttgacaagaaatatttt
gaatctggagcgccatttggcgacgaagcgatttatgcgtggggcatgccccgaacctat
ggagtacgggtcacttcaaagttttag
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