Sphingobium sp. JS3065: NUH86_06815
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Entry
NUH86_06815 CDS
T10812
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjs03032
]
NUH86_06815
03036 Chromosome and associated proteins [BR:
spjs03036
]
NUH86_06815
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_06815
DNA replication proteins [BR:
spjs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NUH86_06815
Chromosome and associated proteins [BR:
spjs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NUH86_06815
DNA repair and recombination proteins [BR:
spjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NUH86_06815
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UZW56472
LinkDB
All DBs
Position
1:1423359..1423649
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AA seq
96 aa
AA seq
DB search
MIRSELIHKLAEENPSLNLQEVERIVDLFFKEIVDRLSTGGRVELRGFGAFTTRAREART
GRNPRTGEQVPVDAKRVPYFKPGKEMRERLNTKATV
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctctgaactgatacataaactggctgaggaaaatccaagcctcaatctccag
gaagtcgaaaggatcgtcgatcttttcttcaaggaaattgtcgatcgcctttcaaccggc
gggcgagtggagttgcgcggcttcggcgcgtttacgacacgcgcacgcgaggcgcgaaca
ggacggaatccgcgaacgggggagcaggttccggtggatgccaagcgcgttccctatttc
aagcccggaaaggaaatgcgggaacggttgaacacaaaagccaccgtctga
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