Sphingobium sp. JS3065: NUH86_06895
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Entry
NUH86_06895 CDS
T10812
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs03030
DNA replication
spjs03430
Mismatch repair
spjs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NUH86_06895
03430 Mismatch repair
NUH86_06895
03440 Homologous recombination
NUH86_06895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjs03032
]
NUH86_06895
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_06895
Enzymes [BR:
spjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NUH86_06895
DNA replication proteins [BR:
spjs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NUH86_06895
DNA repair and recombination proteins [BR:
spjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NUH86_06895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_30
AAA_assoc_2
Cdc6_lid
AAA_19
AAA_14
ResIII
DUF815
PIF1
AAA_18
AAA_24
DEAD
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
UZW56486
LinkDB
All DBs
Position
1:complement(1441922..1443538)
Genome browser
AA seq
538 aa
AA seq
DB search
MSDSPQPYRVLARKYRPRNFRELIGQDAMVQTLANAIRRGRLAHAFLMTGVRGVGKTSTA
RLIAKALNCVGPDGQGAPTIDPCGVCKFCEGISEGRDPDVIEMDAASHTGVDDIRSIINI
SRNTGFGARFQVFIIDEVHMLSRSAFNALLKTLEEPPENVKFIFATTEVEKVPVTILSRC
QRFDLRRIPAELLAAHFAHVVEAESVAAEPDALALIAQAAEGSARDGLSILDQAIAHAEM
GEGSPIVTAMQVRDMLGLSDRGSTRRLLGLLLEGDTGALLGAVRDQYALGVEPLSLMRGL
LELVHTVTLVKAGRDIASPGQSAEEREALAEWASQLGFAPLHRLWQLLLKGHDEVASAAL
PIESCEMALLRVMHAATMPDPGEIARLLRDGAPAAATPGQPPQSAPAGNPAAQLPASFED
LIELLYQRGRGQLSQHLKDCAGLSHYAPPLLEIRLTDPWYGEGDFFRETARALKDITGLT
WQVRQAEGPVAPTLMAQENRQREDARAAIMETPVVKAALTAFPDAELSDELEQWSAER
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccctcagccctatcgcgtcctcgcgcgcaaatatcgcccgcgcaatttc
cgggaactgatcgggcaggacgcgatggtccagacgctggccaatgcgatccgccggggc
cgcctggcccatgccttcctgatgaccggcgtgcgcggcgtgggcaagacctccaccgcg
cggctgatcgccaaggcgctgaactgcgtcggcccggacgggcagggcgcaccgaccatc
gatccctgcggcgtctgcaaattttgcgaaggcatttcggaggggcgcgatcccgatgtc
attgaaatggacgctgccagccatacgggcgtcgacgacatccgttcgatcatcaatatt
tcccgtaataccgggttcggcgcccgctttcaggttttcatcatcgacgaagtgcatatg
ctgtcgagaagcgcgttcaatgctcttctgaaaacactggaagaaccgcctgaaaatgtg
aaatttatcttcgccaccaccgaagtcgagaaggttccggtcaccatcctgtcccgctgc
cagcgcttcgacctgcgccgcattccggcggaattgctggccgcccacttcgcccatgtg
gtcgaggcggaatcggtcgccgccgaacccgatgcgctggcgctgatcgcccaggccgcc
gaaggttccgcccgcgacggcctttccatcctggatcaggccatagcccatgccgaaatg
ggtgaaggatcgccgatcgtcacggccatgcaggttcgcgacatgctgggcctgtcggat
cgcggatcgactcgccgcctgctcggcctgctgctggagggcgacacgggcgcgctgctg
ggcgcggtgcgcgatcaatatgcgctgggcgtcgagcctctgtccctgatgcgcggcctg
ctcgaactggtccacaccgtcacgctggtgaaggccgggcgcgacatcgccagtcccggc
cagtccgccgaggaacgcgaagcgctggccgaatgggcttcgcaactgggcttcgcgccg
ctccaccgcctctggcagcttctgctcaaggggcacgatgaggtcgccagcgccgcgctg
cccatcgaaagctgcgaaatggcgctgctgcgcgtgatgcacgccgccaccatgcccgac
ccgggcgagatcgcccgcctgctgcgcgatggcgcgcctgccgccgcaaccccaggccag
ccgccgcaatcggccccggcaggcaatccggccgcgcagcttcccgccagcttcgaagat
ttgatcgaactgctctaccagcgcggcagggggcaattgtcccagcatctgaaggattgc
gcgggcctttcccactatgcgccgcccttgctggaaatccgcctgaccgacccctggtat
ggcgaaggcgatttcttccgcgaaaccgcccgggcgctcaaggacattacgggcctcacc
tggcaggtgcggcaggccgaaggcccggtcgcgccgaccctgatggcgcaggaaaaccgg
cagcgcgaggatgcccgcgccgccatcatggaaaccccggtggtcaaggcggcgttgacc
gccttccccgatgccgagcttagcgatgagcttgaacaatggagcgcagagcgatga
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