Sphingobium sp. JS3065: NUH86_06945
Help
Entry
NUH86_06945 CDS
T10812
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs00260
Glycine, serine and threonine metabolism
spjs00460
Cyanoamino acid metabolism
spjs00630
Glyoxylate and dicarboxylate metabolism
spjs00670
One carbon pool by folate
spjs00680
Methane metabolism
spjs01100
Metabolic pathways
spjs01110
Biosynthesis of secondary metabolites
spjs01120
Microbial metabolism in diverse environments
spjs01200
Carbon metabolism
spjs01230
Biosynthesis of amino acids
spjs01240
Biosynthesis of cofactors
spjs04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NUH86_06945
09102 Energy metabolism
00680 Methane metabolism
NUH86_06945
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NUH86_06945
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NUH86_06945
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NUH86_06945
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NUH86_06945
Enzymes [BR:
spjs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NUH86_06945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
DUF1815
Motif
Other DBs
NCBI-ProteinID:
UZW56816
LinkDB
All DBs
Position
1:1450135..1451424
Genome browser
AA seq
429 aa
AA seq
DB search
MSDIRSEGYFTRSLADADPAVFAGVTHELKREQNQIELIASENIVSKAVLEAQGSVFTNK
YAEGYPGKRYYQGCAPSDEVEQLAIDRAKQIFNCGFVNVQPHSGAQANGAVMLALTRPGD
TIMGLSLDAGGHLTHGAKPALSGKWYNAVQYGVREDTHVIDYDALEAQAIEAKPTLIIAG
GSAYPRHLDFARFRAIADKVGALLMVDMAHFAGLVAGGAHPTPFGHAHVVTTTTHKTLRG
PRGGMILTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKTYAQAIVTNA
QALAAKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCNKNGVPGDPLP
PTKTSGIRVGSPAGTTRGFGVAEFEAIGDMIADVLEGLRDHGEHGDAAVEANVRERVSAL
CARFPIYEG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
ctgtccgacattcgttcggaaggttatttcacgcgcagcctggccgatgccgatccggcg
gtcttcgcgggcgtcacccatgaactgaagcgcgagcagaaccagatcgagctgatcgct
tcggaaaatatcgtgtcgaaggcggtgctggaggcgcagggttcggtcttcaccaacaaa
tatgcggaaggctatccgggcaagcgctattatcagggctgcgcgccgtcggacgaggtc
gagcaactggccatcgaccgggcgaagcagatcttcaactgcggcttcgtcaacgtgcag
ccgcattcgggcgcgcaggcgaacggcgcggtgatgctggcgctgaccaggccgggcgac
accatcatgggcctgtcgctggacgcgggcggccacctgacccacggcgcgaagcccgcg
ctttcgggcaaatggtataatgccgtgcaatatggcgtgcgcgaagacacgcatgtgatc
gactatgacgcgctggaggcgcaagccatagaggccaagcccacgctgatcatcgcgggc
ggttcggcctatccccgtcacctcgacttcgcgcggttccgggcgattgccgacaaggtc
ggcgcgttgctgatggtcgacatggcgcatttcgccggtctggtggccggtggcgcgcat
ccgacgcccttcggccatgcccatgtggtgaccaccaccacgcacaagaccctgcgcggt
ccgcgtggcggcatgatcctgaccgatgacgaagccatcgcgaagaagatcaactcggcg
gtgttccccggccttcagggcgggccgctgatgcatgtgatcgcggcgaaggcggtcgct
ttcggcgaagcgctgcggccggagttcaagacctatgcgcaagccatcgtcaccaacgcc
caggcgctggccgccaagctggagcagcgcggcctggccgtggtgtccggcggcacggac
acgcatctggcgctgatcgacctgcgcccctacggcatttcgggcaaggacgcggacgag
gcgctggaacgcagcttcatcacctgcaacaagaacggcgtgccgggcgacccgctgccg
ccgaccaagaccagcggtattcgggtcggttcccctgcgggaacgacgcgcgggttcggc
gtggcggaattcgaagccatcggcgacatgatcgcggacgttctggaagggctgcgcgat
catggcgagcatggcgatgcggcggtcgaggccaatgtgcgggagcgcgtctcggctctc
tgcgcccgtttcccgatctacgaaggataa
DBGET
integrated database retrieval system