Sphingobium sp. JS3065: NUH86_07955
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Entry
NUH86_07955 CDS
T10812
Name
(GenBank) TraC family protein
KO
K12063
conjugal transfer ATP-binding protein TraC
Organism
spjs Sphingobium sp. JS3065
Brite
Secretion system [BR:
spjs02044
]
Type IV secretion system
Conjugal transfer pilus assembly protein
NUH86_07955
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NCBI-ProteinID:
UZW56672
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Position
1:1665013..1667538
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AA seq
841 aa
AA seq
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MSAPGSKRGRGLSYSRMRNAVRRDAYSDYLPLVAWDAESEAFLCIDDTWGHAWEIVPTAY
MFAHVQGALQGLLNVNFPDGTVLQLHTFADPLIDDALDAFLDLKTRDDPLIQASARRTRE
YLSRGRHGLKALHGIPVRNFRTLLSIKTRRPLGEDLRRQVEEQLAKLGIRRLEPEEMISF
YRRIFNGVTQSAPGVFADGATIGAPTLAKQIIDAGPDLLFEGPEVFIGNQVARCLTPKAP
ARRITAERANRLLGGMRGSAEDSDQIGGPFLYTLNILFDHSQFEIHKRAQILSAQKAAGS
FAVEVGKQIEEIGWILDEAGNSKFVRVIPMVWVFGRDRAHARELAARAKRLWESEPLPFS
MQEESYLNPTLLPMSLPFGLYPDRTTLRMLERDFRMPVKAAVLLAPIQTDFRGGGRPALL
YTGRKGQLITLDLFDPRINNYNFIVSAESGAGKSFLLNNLCQQYYACGALIRIIDIGGSY
RKLCTLCSGRYIDIGEEQLVLNPFDMGLALDGDDKQSAITMAVAIVAEMANASTRKGVST
SEWNLLKSAVQWTIDTGRADHGIDSVREWLGTYPAHAGSDLDRVDHLVPVARELAFNLRD
FGSDGAYGHYFNGPSTLDIRSDEFVVLELERLKAMPDLFNVIVMVVVNAVTQELYLSARD
RPRFVLCDEAAQFMTRTEGQDLSRLAEAFGQGYRRARKYRGSFGIVLQSMNDLTLFGGTG
QVILENAATRFLLQGSTYDRAVENKILDYSGFVLDLLKSVRNSKPNYSEVFIDSPLGLGI
ARLVVDPFSYWINTSAPDEVAAFEALIGLGLSPLEAVCRLAGVDPAEILGLPDPVRLAAA
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcctggctcaaagcgaggccgcgggctctcttattctcgcatgcgcaacgcg
gtacgccgcgacgcctattccgattatctgccgctcgtcgcctgggacgcggagagcgag
gcgttcctctgcatcgacgacacatggggccacgcgtgggagatcgtgccgaccgcgtac
atgttcgcgcatgttcagggtgcgctgcagggcctgctgaacgtcaatttcccggacggc
acggtcctccaactccacaccttcgccgacccgctgatcgacgacgcgctcgacgcgttt
ctcgatctcaaaacccgcgacgaccccctcatccaggcgtccgcgcgacgcacccgcgaa
tatctgagccggggtcgacatggcctgaaggccttgcacggcatccccgtgcgaaacttt
cgcacgctgctgtcgatcaagacgcggcgccccctcggcgaggatcttcggcgccaagtc
gaggagcaactcgccaagcttggcattcgccgcctcgagcccgaggagatgatctctttc
taccgccgcatcttcaacggtgtcacgcaatcggcacccggtgtgttcgccgatggcgcg
acgatcggcgcgccgacgctcgccaagcagatcatcgacgctggccccgacctcctgttc
gagggaccggaggtctttatcggcaaccaggtcgcgcgctgcctgacgcccaaggcaccc
gcgcggcgcatcactgccgagcgcgcgaaccgccttctgggcgggatgcgcggctcggcg
gaagacagcgaccagatcggcggtccgttcctctacacgctgaacatcctgttcgaccat
tcacagttcgagatccacaaacgcgcgcagatcctttccgcgcagaaggctgcgggctcc
ttcgcggtcgaggtcggcaagcagatcgaggagatcggctggattctcgatgaggcgggc
aactcgaagttcgtccgcgtcatcccgatggtctgggtattcggtcgcgaccgcgcccat
gcccgcgagctcgccgcccgcgcgaagcgtctgtgggagagcgaaccactgcccttctcg
atgcaggaggagagctatctcaatccgaccctgctcccgatgagcctgccattcgggctg
tatccggaccgcacgacgctgcgcatgcttgagcgcgacttccgcatgccggtgaaggcg
gctgttctgctggcgccgattcagaccgactttcgcggcggcggccgaccggctttgctc
tacacgggccgcaaaggtcagcttatcacgctcgatctcttcgatccgcgcatcaacaat
tataatttcatcgtctcggcggagtccggagcgggcaagagcttcctgctcaacaatctt
tgccagcaatattatgcgtgcggcgcgctcatccgcatcatcgacatcggcgggagctat
aggaagctctgcacgctttgctcgggccgctatatcgatatcggcgaggagcaactggtc
ctcaatccgttcgacatgggcctggcgctcgacggtgacgacaagcagtcggcgatcacc
atggcggtggcgatcgtcgccgaaatggccaatgcctcgacgcgcaagggcgtttcgacc
tccgaatggaatctgctgaaatcggccgtccagtggacgatcgatacgggccgtgccgat
catggcatcgactcggtgcgcgaatggctcggcacctatccggcgcatgctggaagcgac
cttgatcgggttgatcacctcgtgccggtagctcgtgagcttgccttcaacttgcgggat
ttcggctccgacggcgcctatggccattatttcaacggcccctcgacgctcgacatcaga
tcggacgagttcgtcgtgcttgagctcgaacggctcaaggcgatgcccgatcttttcaac
gtgatcgtcatggtggtggtcaatgccgtcacccaggagctgtatctctccgcccgcgat
cggccgcgcttcgtgctgtgcgacgaggccgcgcagttcatgacgcggaccgagggacag
gacctgagccgcctcgccgaggctttcggccaaggctatcggcgcgcgcgcaaatatcgc
ggttcgtttggcatcgtgctgcaatcgatgaacgacctgactctgtttggcggcaccgga
caggtgatcctggaaaacgcggcaactcggttcctgctgcagggctcgacctatgatcgc
gcggtcgagaacaagattctcgactattcggggttcgttctcgacctcctgaaatcagtc
cgcaactccaagccgaactatagcgaggtcttcatcgactccccattgggcctgggcatc
gccaggctcgttgtcgaccccttctcctactggatcaatacgtcggcgcccgatgaggtc
gcagccttcgaggccctgatcgggctgggtctgtcgccgctcgaggcggtttgccgcctc
gcaggcgtcgatcccgccgagatccttggattgccggatccggtccggctggcggcagcg
gagtga
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