Sphingobium sp. JS3065: NUH86_08590
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Entry
NUH86_08590 CDS
T10812
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NUH86_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spjs03019
]
NUH86_08590
Enzymes [BR:
spjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NUH86_08590
Messenger RNA biogenesis [BR:
spjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NUH86_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
UZW53627
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All DBs
Position
1:1805085..1806293
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AA seq
402 aa
AA seq
DB search
MTSLLPDADWRHRPGLDALLKALGAEQGLVRFVGGAVRDGLLGLPVNDLDIATVIDPKGV
MERLKLAGIKAVPTGIDHGTVTAVIHGWPVEITTLRRDVSTDGRRATIAYTGDWREDAAR
RDFTINALYADPLTHEITDFFGGVADLKAHRVRFIGDADARIAEDHLRILRYFRFLARFG
DDRPDAASYAACRAAANSLMALSRERIADELLKLLAVPRPLAALRLMIDGGILLPVVPEI
DGSGLARLSALIEREAASGAGLSALRRLAALLPPDPRAADQVGARLKLSNKARKRLMTAL
EGGGGETPRALAFRIGVEGAIDQILIDPAASLDSMGTLTDWTPPRLPISGGALIARGLQP
GPDVARALAQVQEIWVAEGFPDEARVAEIADQTVSKFQRARQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtctgcttcctgacgcggactggcgccatcggcccggcctggacgcactgctc
aaggcgctgggcgcggagcagggccttgtccgcttcgtcggcggcgcggtacgggacggg
ttgctcggcctgccggtgaacgacctggacatcgcgaccgtcattgaccccaagggagtc
atggaacgcctgaagctcgccgggatcaaggccgttcccaccggcatcgatcatggcacc
gtgacggcggtcatccatggctggccggtcgagatcaccaccctgcgccgggatgtcagc
actgacggacgacgcgccaccatcgcctataccggcgactggcgggaggatgcggcgcgg
cgcgatttcacgatcaacgccctttatgccgacccgcttacccatgaaattacggatttc
ttcggcggcgtggcggacctgaaggcgcatcgggtccgcttcatcggggatgccgacgcc
cgcatcgcggaggaccatctgcgcatcctgcgttatttccgtttcctcgcccgtttcggc
gatgaccggcccgatgcggcgtcttatgccgcctgccgcgccgccgccaacagcctgatg
gccctttcacgcgagcgcatcgcggacgaactgctgaaattgctcgccgtgccccggccc
ctcgccgcgcttcggctgatgatcgacgggggcatattgctgccggtcgttccggagatc
gacggaagcgggcttgcccgcctctccgccctgatcgagcgtgaagccgcctccggcgct
ggcctttccgccctgcgccgtctggccgccctgctcccgcccgatccgcgcgctgccgat
caggtcggcgcccggctgaaattatccaacaaggcccgcaagcgcctgatgaccgcgctg
gagggcggtggcggcgaaacgccccgcgccctcgcctttcggatcggcgtcgaaggggcg
atcgatcagatattgatcgatcccgcggcatcgctggatagcatggggacgctcacggac
tggaccccgccccgcctgccgatcagcggcggcgcgctgatcgcgcgtggcctgcaaccc
ggcccggacgtggcaagggcgctggcgcaggttcaggaaatctgggtggcggagggcttt
cccgacgaagcccgcgtggccgagatcgcggatcagaccgtttcgaaattccagcgcgcc
cgccaatag
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