Sphingobium sp. JS3065: NUH86_11530
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Entry
NUH86_11530 CDS
T10812
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs00020
Citrate cycle (TCA cycle)
spjs00190
Oxidative phosphorylation
spjs00650
Butanoate metabolism
spjs00720
Other carbon fixation pathways
spjs01100
Metabolic pathways
spjs01110
Biosynthesis of secondary metabolites
spjs01120
Microbial metabolism in diverse environments
spjs01200
Carbon metabolism
Module
spjs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spjs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spjs_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NUH86_11530 (sdhA)
00650 Butanoate metabolism
NUH86_11530 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NUH86_11530 (sdhA)
00720 Other carbon fixation pathways
NUH86_11530 (sdhA)
Enzymes [BR:
spjs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NUH86_11530 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
UZW54156
LinkDB
All DBs
Position
1:complement(2368244..2370046)
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AA seq
600 aa
AA seq
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MSEAYKIIDHTYDTVVVGAGGSGLRATMGSAEAGLKTACITKLFPTRSHTVAAQGGIAAS
LGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPAAVIELEHAGVPFSRNDNGTIYQ
RPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYIEYFALDLIMENGE
CRGVIALCMEDGSIHRFRSKAVVLATGGYGRAYFSATSAHSCTGDGGGMVLRAGLPLQDL
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMAME
MREGRGVGPNKDHIFLHLDHIDPKVLAERLPGITESGKIFAGVDLTRQPLPVTPTVHYNM
GGIPCNYHGQVVTKVGDDPEVVVPGLYAVGEAACVSVHGANRLGSNSLIDLVVFGRATGL
HLKETIKPNGSHRPLPSDAADLALSRLDHYRNAKGGSPTAKIRLEMQHTMQKHAAVFRDS
ALLAEGVTKMTQVNQSLADVGVSDRSLIWNTDLIETLELDNLMSQAVCTMVSAENRKESR
GAHAHEDFPNRDDAEWMKHTVSWFEGWGGKSGKVTLDYRPVHDYTLTDEAEYIKPKARVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcctacaagatcatcgaccacacctacgacacggtcgtcgtgggtgctggc
ggctccggcctgcgcgccaccatgggcagcgcggaggcgggcctgaagaccgcctgcatc
accaagctgttcccgacccgcagccacactgtggcggcgcagggcggcatcgcggcgtcg
ctgggcaacaactcgcccgaccactggacctggcacatgtacgacaccgtcaaggggtct
gactggctgggcgaccaggatgcgatcgaatatatggtgcgcgaggcgcccgccgccgtg
atcgagctggaacatgccggcgtgccgttcagccgcaacgacaatgggacgatctaccag
cgtcccttcggcggccacatgcagaatatgggcgccgggccgccggtgcagcgcacctgc
gccgccgccgaccgtaccggccatgcgatgctgcacgctctgtatcagcagagcttgaag
tacgacgccgacttctacatcgaatatttcgccctcgacctgatcatggaaaatggcgag
tgccggggcgtgatcgccctctgcatggaagacggctcgatccaccgcttccgcagcaag
gcggtcgtgctggcgacgggcggttatggccgtgcctatttctccgccacttcggcgcat
agctgcaccggcgacggcggcggcatggtgctgcgcgctggcctgccgctccaggatctg
gagttcgtgcagttccacccgaccggcatttacggcgcgggcgtactcatcaccgaaggc
gcgcgcggcgagggcggctacctcaccaattccgagggcgagcgcttcatggagcgctat
gcgccgtccgcgaaggatctggcgtcgcgtgacgtcgtctcgcgctcgatggcgatggaa
atgcgcgaggggcgcggcgtggggccgaacaaggatcacatcttcctgcacctcgaccat
atcgatcccaaggtgctggcggagcgtctgccgggcattaccgaaagcggcaagattttc
gcgggcgtggacctcacccgtcagccgctgccggtgacgccgaccgtccactacaatatg
ggcggcatcccctgtaactatcatggacaggtggtgaccaaggtcggcgacgatccggaa
gtcgtcgtgccgggcctctatgcggtcggcgaagcggcctgcgtgtcggtccatggcgcg
aaccgcctgggttccaactcgctgatcgaccttgtcgtgttcggccgcgccaccggcctg
cacctcaaggaaacgatcaagcccaacggctcgcaccgtccgctgccgagcgatgccgcc
gatctggcgctgagccgcctcgatcattatcgcaacgccaagggcggctcacccacggcg
aagatccgtctcgaaatgcagcacaccatgcagaagcatgccgccgtgttccgcgacagc
gcgctgctggccgagggcgtcaccaagatgacgcaggtcaaccagagcttggctgatgtt
ggcgtatcggatcgctcgctgatctggaacaccgacctgatcgagacgctggagctggac
aacctgatgtcgcaggcggtctgcaccatggtcagcgccgaaaaccgcaaggaaagccgc
ggcgcccacgcgcatgaggatttcccgaaccgcgacgacgccgaatggatgaagcacacc
gtaagctggttcgaaggctggggcggcaagagcggcaaggtgacgctcgattaccgcccg
gtgcacgattacacgctcacggacgaagcggaatatatcaagcccaaggcccgcgtttac
taa
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