Sphingobium sp. JS3065: NUH86_11705
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Entry
NUH86_11705 CDS
T10812
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs00300
Lysine biosynthesis
spjs00470
D-Amino acid metabolism
spjs01100
Metabolic pathways
spjs01110
Biosynthesis of secondary metabolites
spjs01120
Microbial metabolism in diverse environments
spjs01230
Biosynthesis of amino acids
Module
spjs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NUH86_11705 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NUH86_11705 (lysA)
Enzymes [BR:
spjs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NUH86_11705 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UZW54188
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All DBs
Position
1:complement(2405503..2406783)
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AA seq
426 aa
AA seq
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MDHFTYVDGAMLVEQVPMAEIAAQVGTPVYIYSTATLTRHVGVFREGLSQLADPLIAFAV
KANPNAAVLATLGRQGLGADVVSAGELLRAIAAGIPADRIVFSGVGKTAAEMRIALEKGI
YQFNLESEPEAEMLSEVALSMGRKAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL
ASYAAARDLPGLDVQGVAVHIGSQLTDLTPLEAAFVKVGALIEKLRGEGHDIRTADLGGG
LGVPYDPSQPLPPSPADYGAMVTRITQGWNVRLMFEPGRLIVGNAGVLLSQVVRVKQGAQ
APFVIVDAAMNDLLRPSLYDAWHDIRAVQPSGERAAANVVGPVCETGDTFAMHRDMDVVG
AGDLVAFMTAGAYGATMASTYNSRALTPEVLVSGDKWAVVRARPPIETLIQGDNIPAWIA
SEGVQD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttggaccattttacctatgtcgatggcgcgatgctggtggagcaggtgccgatggcggaa
atcgccgcgcaggtcggcacgcccgtctatatctattcgaccgcgaccctgacccgccat
gtcggcgtgttccgcgaaggcctgtcgcagcttgccgatccgctgatcgccttcgcggtg
aaggccaatcccaacgccgccgtgctggctacgctgggaagacagggtctgggcgcggac
gtggtgtcggcgggcgaattgctgcgcgccatcgcggcgggcattcccgcggaccgcatc
gtcttttccggcgtcggcaagacggcggctgagatgcgcatcgcgctggaaaagggcatc
taccagttcaatctggaaagcgaaccggaagcggagatgctgtccgaggttgcgctctcc
atgggcaggaaggcgccggtcgcctatcgcatcaatcccgatgtcgatgcgggcacccat
gcgaagatttcgaccggcaagtcggaaaacaagttcggcattccctatgaccgggcgctg
gccagctatgccgccgcccgcgacctgccgggtttggatgtgcagggcgtggcggtgcat
atcggcagccagctcaccgacctgaccccgctggaagccgccttcgtcaaggtcggcgcg
ctgatcgaaaagctgcgcggtgaaggtcatgacatccgcaccgccgacctgggtggcggc
ctgggcgtgccctatgatccctcgcagcccctgccgcccagccccgccgactatggcgcg
atggtgacgcggatcacgcagggctggaacgtccgcctgatgttcgaaccggggcgtctg
atcgtcggcaatgcgggcgtgctgctgtcgcaggtggtgcgggtgaagcagggcgcgcag
gccccgttcgtgatcgtggacgcggcgatgaacgacctgctgcgccccagcctctacgat
gcctggcacgacatccgcgccgtccagccgagcggcgagcgggccgccgccaatgtggtg
gggccggtgtgcgagacgggcgacaccttcgccatgcatcgcgacatggatgtggtgggc
gcgggcgatctggtcgccttcatgaccgcgggcgcctatggcgcgacgatggcgagcacc
tataacagccgcgccctgaccccagaagtgctggtgtccggcgacaaatgggccgtggtc
cgcgcccgtccgcctatcgagacgctgatccagggcgacaatattccggcctggatagca
tcagagggcgtgcaggactga
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