KEGG   Sphingobium sp. JS3065: NUH86_11705
Entry
NUH86_11705       CDS       T10812                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
spjs  Sphingobium sp. JS3065
Pathway
spjs00300  Lysine biosynthesis
spjs00470  D-Amino acid metabolism
spjs01100  Metabolic pathways
spjs01110  Biosynthesis of secondary metabolites
spjs01120  Microbial metabolism in diverse environments
spjs01230  Biosynthesis of amino acids
Module
spjs_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:spjs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NUH86_11705 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NUH86_11705 (lysA)
Enzymes [BR:spjs01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     NUH86_11705 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: UZW54188
LinkDB
Position
1:complement(2405503..2406783)
AA seq 426 aa
MDHFTYVDGAMLVEQVPMAEIAAQVGTPVYIYSTATLTRHVGVFREGLSQLADPLIAFAV
KANPNAAVLATLGRQGLGADVVSAGELLRAIAAGIPADRIVFSGVGKTAAEMRIALEKGI
YQFNLESEPEAEMLSEVALSMGRKAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL
ASYAAARDLPGLDVQGVAVHIGSQLTDLTPLEAAFVKVGALIEKLRGEGHDIRTADLGGG
LGVPYDPSQPLPPSPADYGAMVTRITQGWNVRLMFEPGRLIVGNAGVLLSQVVRVKQGAQ
APFVIVDAAMNDLLRPSLYDAWHDIRAVQPSGERAAANVVGPVCETGDTFAMHRDMDVVG
AGDLVAFMTAGAYGATMASTYNSRALTPEVLVSGDKWAVVRARPPIETLIQGDNIPAWIA
SEGVQD
NT seq 1281 nt   +upstreamnt  +downstreamnt
ttggaccattttacctatgtcgatggcgcgatgctggtggagcaggtgccgatggcggaa
atcgccgcgcaggtcggcacgcccgtctatatctattcgaccgcgaccctgacccgccat
gtcggcgtgttccgcgaaggcctgtcgcagcttgccgatccgctgatcgccttcgcggtg
aaggccaatcccaacgccgccgtgctggctacgctgggaagacagggtctgggcgcggac
gtggtgtcggcgggcgaattgctgcgcgccatcgcggcgggcattcccgcggaccgcatc
gtcttttccggcgtcggcaagacggcggctgagatgcgcatcgcgctggaaaagggcatc
taccagttcaatctggaaagcgaaccggaagcggagatgctgtccgaggttgcgctctcc
atgggcaggaaggcgccggtcgcctatcgcatcaatcccgatgtcgatgcgggcacccat
gcgaagatttcgaccggcaagtcggaaaacaagttcggcattccctatgaccgggcgctg
gccagctatgccgccgcccgcgacctgccgggtttggatgtgcagggcgtggcggtgcat
atcggcagccagctcaccgacctgaccccgctggaagccgccttcgtcaaggtcggcgcg
ctgatcgaaaagctgcgcggtgaaggtcatgacatccgcaccgccgacctgggtggcggc
ctgggcgtgccctatgatccctcgcagcccctgccgcccagccccgccgactatggcgcg
atggtgacgcggatcacgcagggctggaacgtccgcctgatgttcgaaccggggcgtctg
atcgtcggcaatgcgggcgtgctgctgtcgcaggtggtgcgggtgaagcagggcgcgcag
gccccgttcgtgatcgtggacgcggcgatgaacgacctgctgcgccccagcctctacgat
gcctggcacgacatccgcgccgtccagccgagcggcgagcgggccgccgccaatgtggtg
gggccggtgtgcgagacgggcgacaccttcgccatgcatcgcgacatggatgtggtgggc
gcgggcgatctggtcgccttcatgaccgcgggcgcctatggcgcgacgatggcgagcacc
tataacagccgcgccctgaccccagaagtgctggtgtccggcgacaaatgggccgtggtc
cgcgcccgtccgcctatcgagacgctgatccagggcgacaatattccggcctggatagca
tcagagggcgtgcaggactga

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