Sphingobium sp. JS3065: NUH86_12330
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Entry
NUH86_12330 CDS
T10812
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NUH86_12330 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spjs01007
]
NUH86_12330 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spjs03016
]
NUH86_12330 (aspS)
03029 Mitochondrial biogenesis [BR:
spjs03029
]
NUH86_12330 (aspS)
Enzymes [BR:
spjs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
NUH86_12330 (aspS)
Amino acid related enzymes [BR:
spjs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NUH86_12330 (aspS)
Transfer RNA biogenesis [BR:
spjs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NUH86_12330 (aspS)
Prokaryotic type
Other AARSs
NUH86_12330 (aspS)
Mitochondrial biogenesis [BR:
spjs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NUH86_12330 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
UZW54302
LinkDB
All DBs
Position
1:complement(2526255..2528039)
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AA seq
594 aa
AA seq
DB search
MHAYRTHNCGALTSAEVGDEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ
VIESLRAESVVTVTGRVVARAREAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY
PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGIGFTEYSTPILTASSPEGARDF
LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQEDVWNTMEPVIAQVFEQFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL
ITDVTDHFVESGFGIFASLVESGSVIRAIPAPGAGAGSRKFFDDMNNWARTEGYSGLGYI
NIKDGVPGGPIAKNHGEERTAKLIEALGLGPNDGVFFAAGKESQAAKLAGLARIRVGEQL
DLIDKDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALNDQDPLTINAYQYDM
VCNGYEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGMAAGVD
RIVMLLCGAQNLREVTLFPMNQRAEDLLMGAPSAAEFKQLRELSIRVVEPQTKA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcctatcgcacccataattgcggcgccctgacctcggccgaagtcggcgacgag
gtgcgcgtgtccggctgggtgcaccgcaagcgcgaccatggcgatctggtcttcatcgac
ctgcgcgaccattatggcatggtgcagatcgtcaccgaagtcgacgggccggtgttccag
gtgatcgaatcgctgcgcgccgaaagcgtcgtgaccgtgaccggcagggtcgtcgcccgc
gccagggaggccgtgaacccgaatctgcccaccggggagatcgagattcgcgctctggac
gccgtggtgctttccgccgccgccgacctgccgctgccggtggcgggggagcaggaatat
cccgaggacatccgcctgcgctaccgcttcctcgacctgcggcgcgagacgttgcacgcg
aacatcgtcaagcggacgaagatcatttccgacatgcgccgccgcatggaaggcatcggc
ttcaccgaatattcgacgccgatcctgaccgcgagcagccccgaaggcgcacgcgacttc
ctggtgcccagccgcatccatccggggaaattctacgccctgccgcaggcgccgcagcaa
tataagcagttgctgatggtcgcgggcttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaagacccccgcgccgaccgcctgccgggcgaattctaccagctcgacctcgag
atgagcttcgtcacgcaggaagatgtgtggaacaccatggaaccggtgatcgcgcaggtg
ttcgagcagttcgccgacggcaagccggtgactcccgccggcagcttcccgcgcatcccc
catgccgaagcgatgctgaaatatggcagcgacaagcccgatctgcgcaacccgatcctg
atcaccgacgtcaccgatcatttcgtggagtcgggcttcggcatcttcgcctcgctggtg
gagagcggcagcgtgatccgcgccatcccggcgccgggtgctggcgctggcagccggaaa
ttcttcgacgacatgaacaattgggcgcggaccgaaggttattcgggccttggctatatc
aacatcaaggatggcgtgcccggcggccccatcgccaagaatcatggcgaggagcggacg
gccaagctgatcgaggcgctggggctgggaccgaatgacggcgtgttcttcgcggcgggc
aaggaaagccaggcggcgaagctggcgggtctggcgcggattcgggtgggcgagcagctc
gacctgatcgacaaggaccggttcgaactgtgctggatcgtcgacttccccttctacgaa
tatgatgaggacaccaagtcgatcgacttcgcgcataaccccttctccatgccgcagggc
gggcttgacgcgctgaacgatcaggatccgctgacgatcaacgcctatcagtacgacatg
gtctgcaatggttatgaaatcgcttcgggttcgatccgcaaccagtcgccggaactgatg
gtcaaggcgttcgagaaggtgggtctcagccaggccgatgtggaggaacgtttcggcggg
ctttaccgggcgttccaatatggcgcgccgccgcatggcgggatggcggcaggtgtcgac
cgcatcgtgatgctgctctgcggggcgcagaatctgcgggaggtcacgctgttcccaatg
aaccagcgcgcagaagacctgctgatgggcgcgcccagcgcggcggagttcaagcagttg
cgggaactgagcatccgggtcgtggagccgcagacgaaggcctga
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