Sphingobium sp. JS3065: NUH86_13345
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Entry
NUH86_13345 CDS
T10812
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spjs03036
]
NUH86_13345 (smc)
Chromosome and associated proteins [BR:
spjs03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NUH86_13345 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZW54482
LinkDB
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Position
1:2724023..2727466
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AA seq
1147 aa
AA seq
DB search
MQIKRLKLSGFKSFVDPTELRIEPGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGGG
MEDVIFAGTATRPQRDFAEVSLMTVQEQGELFNAVEVAADGELEVTRRIERGAGSAYRAN
GRDVRAKDIALIFADAATGPHSPALVSQGRIAAVIAARPQERRAMLEEAAGISGLHVRRK
DAEQKLRAAEANLMRLDEILSDMEARANSLRRQAKAAERYIRLSEQIRIAEGRVIFARWR
EAAASADAARAEAKQAETAVAAAQEAQQAAAVHANAAVEALAQKRAAAQAARDAASEAGH
RLTALRTERDGVVRRLHDLAQQADRLEEDRDREGTLANDAAEAIARLTDEIAALKARITE
TEAMRPDFAGRIARADDAARDAELDLAKAMAKQAGEQAELRVAEAALAAARSRLDRAARE
AQRLESEAAALPDAAPLEAKRAEALAAQQQASADRDSAEAAIRTAEASRAQAAEQRATAE
TALSSARATLAALDSEAAALKRAVENGTGNRSRALDRLKAAPGYERALAAALGDDLEAPI
AAEGKRRWAGATALDSDPALPAGCTALSTHVTAPPELARRLAQVAVAESDENQPLAVGQR
LVTRDGQLRRWDGYVAAEGGAAAAERLIRLNRLDAIAAARPAAEAEVETARTAQDAAAAR
ERDAAQTLATGRTQLGNSDQRLRTALRAADEAAAALERLTDRREAIEERLAEARADLASA
QAEHDKAQTARTAMPDGEETRTLVTTLQQASEKARLAVSQLQADQALADRALASDRERMA
AADAEARGWRARAGEAAKRIAAMVERNDAIARERAEIADQPDQLAATIATLSEQGDALTQ
AADAARREESEAEAALRTAEQRAAQAGETLAGCREARATAVARAEAADEKRVETNRLSGE
RFECPPPVLPEKLGFASADIRIAQSEQAEHDRLAAERERIGPVNLVAAQELEELETTQAN
SRAESEELSQAINRLRGSIGSLNREGRQRLLAAFEAVDGHFRRLFTTLFNGGQAHLELID
SDDPLEAGLEIMAQPPGKKLAALTLLSGGEQALTAVALIFGLFLTNPAPICVLDEVDAPL
DDANVERFCDLLDAMVGQTDTRYLIVSHNAVTMARMHRLFGVTMVEQGVSRLVSVNLGGA
EALLAAE
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcagataaagcgtctcaaactttccggcttcaagagcttcgtcgacccgacggagttg
cgcatcgaacccggcctgaccggcattgtcggtcccaatggctgcggcaagtcgaacctg
ctggaagcgatccgttgggtcatgggcgaatccagcgccaagtcgatgcgcggcggcggc
atggaggatgtgatcttcgcgggcaccgccacccgcccccagcgggattttgccgaagtc
tcgctgatgaccgtgcaggaacagggcgaactgttcaacgcggtagaagtcgccgccgac
ggcgaactggaagtcacccgccgcatcgaacgcggcgcgggcagcgcctatcgcgccaat
ggccgcgacgtccgggccaaggacatcgcgctgatcttcgccgacgccgccaccgggccg
cacagcccggctctggtcagccagggccgcatcgccgccgtcatcgccgcccgcccgcag
gaacgccgcgccatgctggaggaagcggcgggcatttccggcctccacgtccgccgcaag
gatgccgagcagaagctgcgcgccgccgaagccaatctcatgcggctggacgaaatcctt
tccgacatggaggcgcgcgccaacagcctgcgccgtcaggccaaggcggcggaacgctat
atccgcctgtccgaacagatccgcattgccgagggccgcgtgatcttcgcccgctggcgc
gaagctgccgcgtccgccgacgccgcccgtgccgaggcgaaacaggccgaaaccgccgtc
gccgccgcgcaggaagcccagcaggccgccgccgtccacgccaatgccgccgtcgaagcg
ctggcgcaaaaacgcgccgccgcccaggctgcccgcgacgcggccagcgaggcaggacac
aggctcacggcgctgcgcaccgaacgcgacggcgtggttcgccgcctccacgacctggcc
cagcaggcggaccggctggaggaagaccgggaccgcgaaggcacgctggccaatgacgcg
gcggaggcgatcgcccgcctcaccgacgaaatcgccgcgctcaaggcccgcatcaccgaa
accgaagcgatgcgccccgatttcgccggccgcatcgcccgcgccgacgatgccgcccgc
gacgccgaactcgaccttgccaaggcgatggcgaaacaggcgggcgagcaggccgagctg
cgcgtggcggaggccgctctcgccgccgcccgcagccgcctcgaccgcgctgcccgcgag
gcgcaaaggctcgaatccgaagccgccgccctgcccgacgccgccccgctggaggccaaa
cgcgccgaagcccttgctgcccagcaacaggccagcgccgaccgcgattctgccgaagcc
gcgatccgcaccgccgaagccagccgcgcgcaagccgccgagcagcgcgccaccgccgaa
accgcactctcttccgcccgcgccaccctcgccgcgctggacagcgaagccgctgccctg
aaacgcgcggtggaaaatggcaccggcaaccgcagccgcgcactcgaccggttgaaggcc
gcccccggctatgaacgcgcccttgccgccgcgctgggcgacgatctggaggcccctatc
gccgccgagggcaaacgccgctgggcaggcgcaacggcactcgacagcgaccccgctctg
cccgcgggctgcacggcgctgtccacccacgtcaccgccccgcccgaactggcccgccgc
cttgcccaggtcgcggtggcggagagcgacgaaaaccagcccctggccgtcggccagcgc
ctcgtcaccagggatggccagcttcgccgctgggacggctatgtcgcggcggaagggggc
gcggccgccgccgaacgcctgatccgcctcaaccgcctggacgccatcgccgccgctcgc
cccgccgccgaggccgaagtcgagaccgcccgcacagcgcaggacgctgccgccgcccgc
gagcgcgacgccgcccagacgctcgccaccggccgcacgcaacttggcaattcggaccag
cgcctgcgcaccgccctgcgcgccgccgacgaagccgccgccgcgctggaacgcctgacc
gaccgccgcgaggcgattgaagaacgcctcgccgaagcccgcgccgaccttgcctccgca
caggccgaacatgacaaggcgcaaaccgcccgcacggccatgcccgatggcgaggaaacc
cgcaccctcgtcaccacgctgcaacaggccagcgaaaaggcccgccttgccgtcagccag
cttcaggccgatcaggcgctggccgaccgcgcgctcgccagcgaccgcgaacgcatggcc
gccgcggacgccgaagccaggggctggcgcgcccgcgcaggggaagccgccaagcgcatc
gccgccatggtcgaacgcaacgacgccatcgcccgggaacgcgccgaaatcgcggaccag
cccgaccagcttgccgccaccatcgccacgctcagcgaacagggcgatgcgctgacccaa
gccgccgacgccgcccgccgcgaggaaagcgaggccgaagccgccctgcgcaccgccgaa
cagcgcgccgctcaggctggcgaaaccctcgccggatgccgggaggcccgcgccaccgcc
gtcgcccgcgccgaagccgccgacgaaaagcgcgtcgaaaccaaccgcctctcgggcgaa
cgcttcgaatgcccgcccccggtcctgccggaaaaactgggcttcgccagcgccgacatc
cgcatcgcccagtccgaacaggccgagcatgaccgcctggcagcggagcgcgagcgcatc
ggcccggtcaacctggtcgccgcgcaggaactggaggaactggaaaccacccaggccaac
agccgcgccgaaagcgaggagttgagccaggcgatcaaccgcctgcgcggttccatcggc
agcctcaaccgcgaaggccgccagcgcctgctcgccgcgttcgaggcggtggacggccat
ttccgccgcctgttcaccaccctgttcaacggcggccaggcgcatctggaactgatcgat
agcgacgatccgctggaggcgggcctggagatcatggcccagccgccgggcaagaagctc
gccgccctgacgctgctttcagggggcgaacaggcgctgaccgccgtggcgctgatcttc
gggctgttcctgacgaatcccgcgccgatctgcgtgctggacgaggtcgacgccccgctg
gacgacgccaatgtcgaacgcttctgcgacctgctcgacgcgatggtgggacagaccgac
acccgttacctgatcgtcagccacaatgccgtgaccatggcccgcatgcaccgcctgttc
ggcgtgacgatggtggagcagggggtgagccgcctcgtctccgtcaacctgggcggcgcg
gaggcgcttctggccgccgaatga
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