Sphingobium sp. JS3065: NUH86_13960
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Entry
NUH86_13960 CDS
T10812
Symbol
pdeM
Name
(GenBank) ligase-associated DNA damage response endonuclease PdeM
KO
K06953
uncharacterized protein
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
NUH86_13960 (pdeM)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Motif
Other DBs
NCBI-ProteinID:
UZW54591
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Position
1:2847638..2848297
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AA seq
219 aa
AA seq
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MVPLSFAGHEFLALPEAALFWPARSALLVADLHFEKASWYARFGQFLPPHDSRATLDMIE
ALVERTGATAVWSLGDSFHDADGAARLDPMTRARLAALTDRLDWVWITGNHDVGMADMPG
GQRRADMQVDGIWLRHEADPADPRPEISGHFHPKFRMSVRGRHVSRRCFVGSRTKLILPA
LGALTGGLDVGHGEIRRVMGAGATALVPVAGRLLRFPIA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggttcccctttcgttcgcgggtcacgaatttctggcgctgccggaagccgcgctgttc
tggccggcgcggtcggccctgctggtggccgacctgcatttcgagaaggcgagctggtat
gcccgtttcggccagttcctgccgccgcatgacagccgggcgacactggacatgatcgag
gcgctggtggagcggacgggcgcgacggcggtctggtccctgggcgacagttttcacgat
gccgatggcgcggcgcggctcgatccgatgacgcgggcgcggctggcggcgctgacggac
cggctcgactgggtctggatcaccggcaatcacgatgtcggcatggcggatatgccgggc
gggcaacgccgcgccgacatgcaggtcgacggcatctggttgcggcatgaggccgaccct
gccgatccccggcccgaaatatcggggcatttccatccgaaattccggatgtcggtgcgc
ggacgccatgtctcgcggcgctgcttcgtcggatcgcgcaccaaattgattttgcccgca
ttgggggcgctgaccgggggcctcgatgtgggacatggtgaaatccggcgcgtcatgggc
gcgggcgcgaccgcattggtgccggtggcgggccgcctgctgcgatttcccatagcatga
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