Sphingobium sp. JS3065: NUH86_14130
Help
Entry
NUH86_14130 CDS
T10812
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjs03032
]
NUH86_14130 (gyrB)
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_14130 (gyrB)
Enzymes [BR:
spjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NUH86_14130 (gyrB)
DNA replication proteins [BR:
spjs03032
]
Prokaryotic type
DNA Topoisomerases
NUH86_14130 (gyrB)
DNA repair and recombination proteins [BR:
spjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NUH86_14130 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
UZW54623
LinkDB
All DBs
Position
1:complement(2886402..2888909)
Genome browser
AA seq
835 aa
AA seq
DB search
MSEESQNNPNSNAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEA
LAGHCDRILITLNPDGSVSVEDNGRGIPTGIHKEEGVSAAEVIMTQLHAGGKFENTSDDN
AYKVSGGLHGVGVSVVNALSEYLDLNIWRDGKEHYMRFAYGDAVAPLKVIGDAPEGKKGT
KVTFLPSTEKVPGDGGTFKNHTEFDFEKLEHRYRELAFLNSGVRLFLADARHEEKKEVEL
FYEGGIAAFVKYLDRNKTPLMPDPIAISGSRDDVTIDVALEWNDSYYENVLCFTNNIPQR
DGGTHLAAFRAALTRTLNNYADKSGMLKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQT
KDKLVSSEVRQPLESLMADKMAEWLEENPQHGKMIVQKVIDAAAAREAAKKARELTRRKG
VMDIASLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRNRHNQAILPLKGKILNVERA
RFDRMLSSKEVGTLIQAMGTGIRDDFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQ
MPQIIEAGHLYIAQPPLYKATRGRSEVYLKNEAALENYLVDNGVDLMALETTEGMRSGED
LRHLIEHGRRMRAVMRYVPRRYNPAIIEALAINGALDPELSQEAQAQRLTNSVTWMDAQD
EEGSWSGRIAEEGGFHFERLWRGVTDHHMIEAGFIGSAEARKLHSIAAEEADSYRTTSRL
VTAKAAAAAEEAGDDDLPVVSKGAVTVTRPSELLEAILASGRKGLAIQRYKGLGEMNAEQ
LWETTLDPDNRSMLRVEVEQADVADEIFTRLMGDVVEPRREFIQDNALNVANLDV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaaagtcagaacaaccccaacagcaacgcctatggcgccgacagcatcaag
gttcttaagggactggatgccgtgcggaaacggcctggcatgtatatcggcgacaccgac
gacggttcgggcctgcaccatatggtgttcgaagtcagcgacaacgccatcgacgaggcg
ctggccgggcattgcgaccgtatcctgatcacgctcaaccccgacgggtcggtcagcgtg
gaagataatggccgcggcatccccaccggcatccacaaggaagaaggcgtgtcggcggcg
gaggtcatcatgacccagctccatgccgggggcaagttcgagaacacgtccgacgacaac
gcctataaggtgtcgggcggcctgcacggcgtgggcgtttcggtggtgaacgcgctcagc
gaatatctggacctgaatatctggcgggacggcaaggagcattatatgcgctttgcctat
ggcgacgccgtggcgccgctcaaggtgatcggggacgctccggaaggcaagaaggggacg
aaggtcaccttcctcccctcgaccgagaaagtgcccggcgacggcggcaccttcaagaat
cataccgagttcgatttcgagaagctggagcatcgctatcgcgagctggccttcctgaat
tcgggcgtgcggctgttcctggcggacgcccggcatgaggaaaagaaggaagtcgagctg
ttctacgaaggcggcatcgcggccttcgtgaaatatctggaccgcaacaagactccgctg
atgcccgatcccatcgcgatttcgggcagccgcgacgatgtgaccatcgacgtcgcgctg
gagtggaacgactcttattatgaaaatgtcctctgcttcacgaacaacattccgcagcgg
gacggcggcacgcatctggccgccttccgcgcggcgctgacccggactctgaacaattat
gccgacaagtccggcatgttgaagaaggagaaggtctcgctgaccggcgaggatatgcgc
gaggggctgaccgccatcgtgtcggtgaagctgcccgatcccaaattctcgtcccagacc
aaggacaagctggtttcctccgaagtccgccagccgctggaaagcctgatggccgacaag
atggcggaatggctggaggaaaacccccagcacggcaagatgatcgtccagaaggtgatc
gacgccgccgccgcgcgcgaggccgcgaagaaggcgcgcgaactgacccggcgcaagggg
gtgatggacatcgcctccctgcccggcaagctggccgactgtcaggaacgcgaccccgcc
aagtccgaactgttcctggtcgaaggcgactcggcaggcggttcggccaagcaggggcgc
aaccggcataaccaggcgatcctgccgctgaagggcaagatattgaacgtggagcgcgcc
cggttcgaccggatgctctcttccaaggaagtcggcaccctcatccaggcgatgggcacc
ggcatccgcgacgatttcaacctggaaaagctgcgctaccacaagatcgtcatcatgacc
gacgcggacgtcgacggcgcgcatatccgcacgctgctgctgaccttcttctaccgccag
atgccgcagatcatcgaggcggggcatctctatatcgcccagccgccgctctacaaggcg
acgcgggggcgttccgaagtctatctcaagaacgaagcggcgctggaaaattatctggtc
gacaatggcgttgatttgatggcgctggaaacgaccgaaggcatgcgttcgggcgaggat
ctgcgccatctgatcgaacatggccggcggatgcgggcggtgatgcgctatgtgccgcgc
cgctataatccggcgatcatagaggcgctggcgatcaacggcgcgctcgatccggaactg
agccaggaggcgcaggcgcagcggctgaccaacagcgtcacgtggatggacgcccaggac
gaagagggaagctggagcggccgcatcgccgaagaaggcggcttccatttcgaacggctg
tggcgaggcgtcaccgaccatcacatgatcgaggcgggtttcatcggatcggccgaggcg
cgcaagctgcacagcatcgccgccgaggaagcggacagctatcgcaccaccagccggctc
gtcacggccaaggcggcggccgccgccgaggaagccggggacgacgatctgccggtcgtg
tccaagggcgccgtcaccgtcacgcggcccagcgaattgctggaggcgattctggcgtcc
gggcgcaaggggctggcgatccagcgctataaaggcctgggcgagatgaatgccgagcaa
ttgtgggaaaccacgctggacccggacaatcgatccatgctgcgggtcgaggtcgagcag
gcggacgtggccgacgaaatcttcacccgcctgatgggcgacgtggtcgaaccgcggcgc
gagttcatccaggacaatgcgctgaacgtcgccaatctggatgtctga
DBGET
integrated database retrieval system
