Sphingobium sp. JS3065: NUH86_15370
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Entry
NUH86_15370 CDS
T10812
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_15370
DNA repair and recombination proteins [BR:
spjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NUH86_15370
Archaeal homologous recombinant proteins
NUH86_15370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
Nuf2_DHR10-like
ABC_tran
AAA_22
AAA_21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UZW54841
LinkDB
All DBs
Position
1:complement(3147725..3151432)
Genome browser
AA seq
1235 aa
AA seq
DB search
MRVLAIRGRNLASLNGDFEVDFEAEPLSDAGIFAITGPTGAGKSTLLDAMCLALFDSVPR
LGAAPARAKFETAQGDELSAGDPRAILRHGSGEGFAELDFVGRDGERYRARWTVQRARQK
TDGRMQATRHNLTRLADGEILGGTKTETLAEIHRLVGLSAEQFRRAVLLAQGDFEAFIKA
DDNERAQLLERLTGSHIYASLGRAAHEKATTLRAQQQAILDRIEAQNGLDDEARRIAEER
QSEAKAVADRTAATLGELSNAVRWETDRAALANKVAECELAASTASAAREEAAPRHEALR
LRKAAFALAGDWTAVQDAAILAQEARQTVVVRQSELEQANDRATQTAAEEKHAAAQLRLE
TERVAAQSSEIEEARAIDRKLSETSASLDGIADVRAARAQALSRCRQLEQAANTLLAEAT
ETRDAQASWLAANAELATLAAQQQELSAELVEIAAVDIKLSELSESAKEAEASKIEANAT
WEAAKAAEEGTAAAATWARNILDEAKASAPSDAAFSAIIEKRDRLGGLSPLLVDWKHQEA
QVETSRDLLVRLRSNLDDAKAERKDLVVRHSQVSSSLPILRAQLQEARRASELAETASGE
AAMQLRATLEDGQACPVCGATEHALSAIDSLLGLQLREQRERIAQLDASLSSKTAEEAVL
ATGIQATDQSILRLDHEIESQTAALAAASNNAQSAFAILSEKCGSVGLDPAGPDFEATLQ
SEHAALDKQRASMTEARTAVTITQVADEKARNEWEKCRAASSLAAQTVRDIEQQSSGIAE
RRSHAKETRDRLARSIDARVGGSADWRQLPDPAAWLDESAKAWRAHSAEHSRLLAAIPGL
EKSVADARTETATAAARFDEIESQAKGWEEDQLRQTDTRKSLLDGDTVDIVVARNEAALS
QSRRALEVAQVEASKAREQQAAATAHKESADQEAERRIKDHLDRQGRFHARLTELAIEED
VVADAAQAGQEAIDQEVEALANIDKAAEHAAALLIQRQQDLTRHDQTDPPSLSGDALAQA
VGEAKRADEAAQKAFQDVQFVLRRDDEVRTQTTKLRADLERERAAARVWLALDELIGDAT
GARFRRFAQGLTLDRLLAHANSRLADLKPRYELQRAPSGDMLIQVIDHDMAGEIRGVHNL
SGGERFLISLALALGLAEMSTGRGLKIESLFIDEGFGALDGASLGQALSVLEHLHATGRR
VGVISHVEEIKERIPVKIEVTPVARGRSELSVISG
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcctggcaatccgcggccgtaatctcgccagcctgaacggcgattttgaagtt
gatttcgaagctgagccactgagcgacgccggcatctttgcgatcaccggtccgaccggt
gcagggaaatctaccctgctcgacgccatgtgcctggcattgttcgattcggtaccacgt
ctcggcgcagcaccggcacgagccaagttcgaaactgcccaaggtgacgagctgtcggcc
ggagacccaagggccatccttcggcatggctccggcgagggtttcgccgagctcgacttt
gttgggcgagacggagagcgctaccgcgcccggtggaccgtgcagcgcgctcgtcagaag
accgatggccgcatgcaggccacccggcacaacctcacgcgccttgctgacggcgagatc
cttggcgggaccaaaactgaaacgctggcggagattcaccgtctcgtcggtttgtcagct
gagcagtttcgtcgggccgtcctcctggcacagggcgatttcgaggccttcatcaaagct
gacgataacgagcgagcccagctactcgaacggctgacggggtcgcatatttatgcgagt
cttggccgcgcagctcatgaaaaggctacgacgctccgggcccagcagcaggcaatcctt
gaccgcattgaggcgcagaacggcctcgacgacgaagcccgtcggattgccgaagaacgg
caaagtgaggcgaaggcggtcgcggatcgaaccgccgctacccttggagaactctccaac
gctgttcgctgggagaccgatcgtgcggccttggccaacaaggtggcagaatgtgagcta
gccgcgtcgaccgcaagcgcagcccgcgaagaagccgcccctcggcatgaggccctgcgc
ctgcgtaaagccgcgttcgccctcgcaggagactggaccgccgtccaggatgcggccatc
ctggcgcaggaagcgcgccaaactgttgtagtgcggcaaagtgaattggagcaagcgaac
gatcgcgcgacgcagacggcagctgaagaaaagcacgcagcagctcagctccggctcgaa
actgaacgggtcgccgctcaatcttctgagatcgaagaagcccgtgcgatcgaccggaag
ctttccgaaacaagcgcatcgcttgatggcatagcagacgttcgcgctgcgcgcgcgcaa
gccctgtccagatgtcggcagcttgagcaggccgctaacaccttgttggctgaggctaca
gaaactcgtgacgctcaggcgtcgtggcttgcggcgaacgccgagcttgccacgttggct
gcacagcagcaggaactctctgcagagctcgtcgagatcgcagccgtcgatataaagctg
tccgagctttcagagagcgcaaaggaagcagaggcctccaaaatagaggccaacgccaca
tgggaagccgcgaaggcagcggaagagggaaccgccgcagctgccacatgggctcgcaac
attttggacgaggctaaggcttcagcaccatccgatgccgccttctcagcgatcattgaa
aaacgggatcgcctgggaggtctttcccctctcctggtagactggaagcatcaagaagct
caggtagaaacatcccgtgatctcctggtccgtctacgcagcaatctcgatgacgctaag
gccgaacgcaaagatctggtcgtccggcattcccaggtcagctcctcccttcctattctg
cgagcgcaattgcaggaggcacggcgtgcgagcgagttagccgaaacggcctcgggcgaa
gcggcaatgcaacttcgcgccacgcttgaggatggacaggcctgcccggtttgcggggcg
accgaacacgcattgagtgcaatcgactcgctcttggggctacagcttcgggagcagcgg
gagcgcatcgcccagctggacgcctcactgtcttcaaagaccgctgaagaggccgttctg
gccacagggattcaggctactgaccagtcaatcctccgactggaccacgaaatagaaagt
cagaccgccgcattggcggcggccagcaataatgcccaatctgcctttgccatcctgtca
gaaaaatgcggctcggtgggccttgatccggccgggccggacttcgaagctactctgcaa
agcgaacacgccgcgctggacaagcagcgcgcttcgatgacggaggcgaggaccgcagtc
acgatcacgcaggtcgccgatgaaaaggctcgaaacgagtgggagaaatgccgcgcagcc
tccagtctcgccgctcagacagtgcgcgatatcgaacagcaatcgagcggcatagcggag
cgccgatcgcacgctaaagaaacacgagatcggctcgcgcgatcgatcgacgcaagggtc
gggggcagcgcagactggcgacagttgcctgacccagcagcctggctcgatgaatctgcc
aaggcttggcgtgcccactctgcggaacattcacggcttctcgccgcaattccggggctg
gagaaatccgttgctgacgcgcgtacagagaccgccacagccgccgcccggttcgacgaa
atcgagtctcaagcgaaggggtgggaggaagatcagcttcggcaaacagacactcggaaa
agcctgcttgacggcgacacggtggatatcgtcgtcgcccgcaacgaagcggccctatcg
cagagccgccgcgctttggaagttgcccaagtagaggccagcaaggcgcgagagcagcag
gcggccgcaaccgctcacaaagagtccgcggaccaagaagcagagcgcaggatcaaggac
catctggatcgccaaggtcgatttcacgcacgccttactgagttggcgatcgaagaagac
gtcgtcgccgacgcagctcaagcgggacaggaggcgatcgatcaggaggttgaggctctt
gccaacatcgacaaggctgcggagcatgccgctgccctactgattcaacggcagcaggat
ctgacccgccacgatcagactgaccctccttccctctccggcgacgcccttgctcaagcg
gtcggcgaagccaagcgcgcggacgaggcggcccagaaggcgttccaagatgttcagttt
gtcctccgccgggatgatgaggtacggacgcagactacgaagctgcgtgccgacctggaa
cgcgagcgggcagcggcgcgggtgtggctcgcccttgatgaactcatcggcgatgcgacg
ggtgctcggttccggcgcttcgcccaagggctaacgcttgaccgactgctagcgcacgca
aattcgaggctggcggatctcaagccccgttatgaactccagcgcgcgcccagcggcgac
atgcttatccaagtgatcgaccatgacatggctggcgaaatccgtggggtgcacaatctt
tcaggcggcgagcgtttcctgattagtcttgccttggcactcggccttgccgaaatgtcg
actggccgcggcctcaagatagaaagcctgttcatcgatgaaggatttggcgcactggac
ggcgccagcctcggccaagccctgtctgtcttggagcatcttcacgcgaccgggcgccga
gtaggcgtcatcagccatgtcgaagagatcaaagaacggatccccgtgaagattgaggtg
acgcccgtcgcccgtggtcgtagcgaactatcggtgatcagtggatag
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