Sphingobium sp. JS3065: NUH86_15705
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Entry
NUH86_15705 CDS
T10812
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
spjs Sphingobium sp. JS3065
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UZW54900
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Position
1:3224960..3229846
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AA seq
1628 aa
AA seq
DB search
MNKKSRFNRMLLLSASIPAAALLANAGGALAAPATVNVPTGAGTGAAVNADIATAITTPA
NPDLTVTIASGADISGASVGYDFVAAGFAAGQGDGAVNLTNDGRVTGLRFGGVGAASAAN
SFTATNNGEVVGGVSATDFGGAVSVTNNGTVGGSVVGSGFGDVTLANGLAGEVGGSLIGQ
ALDAANVSITNTGTVDGDLDGSATTGTVSIANSGDVAGSAFASTSEGAISVTNAASGRIS
GDVSAGSESGAITIANNGQVLGQTDAFSRNTTFTSTGPTTTVSGTTTTTTQSSTSQQTVG
GDIDGTYAGINGSLNFGAGNDGSITQVSGTNSTATVTGTVYGDIYSEASGSSFATQNVAV
STDSRDAAGTGSVVNSSNNTFDVASTGGTSTVNISGTVAPGDSGRNGDVISRGDTASAVI
INGGKVSGNVSSTSQGVAFNGAFTSEDTDTYDAGVFQGSTSVSGTQFNQARAGGDASVSL
QGSSLVNGNVSVEGGASASAAIGSAAKVEQDVFVSTAVPIGPFFTVGDASSTNSSTRTTD
ASGDDTQVDTSLFTVSAPAVAADATLNNAGRIDGDATVAAGFGNATATITGTVGGSVNAS
AFASTSSSGSTSDYSVNGGLNTLTSQTFTDSFADAGGQANVVIDTAAALQGKGVPSVAGN
VFASGVGGASITVEDGSVVGDAGTGTGGNLFANSLGESSSDETVTTYAADGFTPATVAST
FSAAAVGGAASVTNNGTVLGDVEVQGLTSASLVNNGDLGTGGNLFSVSALDADSTVTLTD
TNPTNAGIRSLAATVAAMPVGGNASFTNSGNAFGDVELEGVTGSFINNGILTGTTTLGGS
VFSGSATVDATINTTNVTVTSVAASQTYTVDQNGVSGGFAVTGAVSTQSEVASALSSLLS
PAVPLDASQVDPAAFNLTVGGEAAVKTAAIKSTINLNNGSITLGDIDAQRDDSGAFLTDT
TVNLNGSGFLGASELRSATSTSPAIFTPAATLPEEAEGLFGPTAVRVLGVNTVNKTGAGT
FVVTGAEYVPAEGAAPAAWTMDVGNFNVQAGEVQLDVDGTDAVFGIKGNINNDATLVLGR
RAPTFVQTVGNSIVTPGPEAIKGIELYQQGNYTQTANGTTVVGVNPSLVRFGNLSVNDGG
AAPEVLGPITGGVSVPYFTTPTNAGVFSIPSSVTVDGNLNLAGKVAVTVSKDSLYSTGDG
YTLFTYTGTGNVTATAAPTLASQFVTFGLKHDATAKTVSIEATRNSYATGATNPNAASAA
VGLDSALADVIARVKTDAAGGNGFASVTEIANAQDIANIAAGLDWRLNSAQAAQVFNELS
SAEIYGSLAAVDQNAVFNTTVNRLAARRGYGEALGTQIWFNPSANFAKTGGTSSGASKIK
TNSYGGAFGLDVAYQEDGAFGIGFGYGQHDVTAQGSQEDAQVRTYTIGAYATQGFGPFYG
SFQLAYGFSKFEVERDLDILARTIEADFKGKQLDASLELGYDFAAGSGLVVTPYGKLALR
RWSMNGFTEEGGAGIGLNVDHASKTVFSPVLGVKAGALLGDADGIAYRPYAKVQYSFQGS
IGSDRTVQYLGGGDAFRLKGVDPDGNGLIELGIDASVNKRVNLFLSGGYGFGGHNSLGQV
RGGISFGF
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaagtcgaggttcaaccggatgctgctgttgtcagcctccataccagcggcg
gctctgctcgcaaacgctggtggtgcattggcggctcccgccacagtgaacgtgccgacc
ggcgcagggaccggcgcggccgtaaacgccgacattgcaacggccatcaccacgccagcc
aatcccgacctcacggttacgattgccagcggcgcggatatcagcggcgcgagcgtcggc
tatgatttcgttgcagcaggttttgctgcgggtcagggcgacggcgcggtaaacctcacc
aatgatggtcgcgtgaccggcctgaggtttggcggcgtgggtgcggcaagtgccgccaac
agctttaccgccaccaacaatggtgaagtcgtcggcggcgtaagcgcgacggactttggc
ggcgcggtatcggttaccaacaatggcactgtaggcggcagcgttgtcggctctggcttt
ggtgacgtcacactcgcaaacggcttggccggtgaagtgggtggcagccttatcgggcag
gcgctcgacgccgccaacgtctcgatcactaacactggcactgtcgatggcgacctcgat
ggatcggccaccaccggcaccgtaagcatcgccaacagcggcgatgttgcaggcagcgcc
tttgcctcgaccagcgaaggggcgatctccgtcaccaacgccgcgtctggccgcatcagc
ggcgatgtgtcagcgggatccgagtccggcgcgatcacgatcgccaacaacggccaggtc
ctgggtcagactgatgcgttcagccgcaacacgaccttcacctcgaccggtccgacgacc
acggtatcgggcaccaccaccaccaccacccagtcgagcacttcgcagcagaccgtcggc
ggcgatatcgatggtacttacgcgggtatcaatggctcgctgaacttcggtgctggcaat
gacggcagcatcactcaggtgagcggcacgaacagcacggcgaccgtgacgggcaccgtg
tacggcgacatctactccgaagcgtctggctcttcgtttgctacgcagaatgtggccgtg
tcgaccgattcgcgcgacgcggcgggcaccggctcggtcgtgaacagcagcaacaacacc
ttcgacgtggcgtcgaccggcggcacaagcacggtcaacatctccggcacggtcgcgcca
ggcgattcgggccgcaatggtgatgttatctcccgcggcgatactgcgagcgccgtcatc
atcaacggcggcaaggtgtcgggcaatgtgtcctcgaccagccagggcgtggcgttcaat
ggggcattcacctcggaagacaccgacacctatgacgcgggcgttttccagggttccacc
tcggtaagcggcacgcagttcaatcaggcgcgggcaggcggagacgcttccgtctcgctt
cagggaagcagtctggttaacggcaatgtgagcgttgagggcggtgcctctgcttcggca
gcaatcggctcggcagccaaggtcgaacaggatgtgttcgtcagcacggcagtcccgatt
ggcccattcttcaccgtaggcgatgcctcgtccacgaactccagcacgcggacgacagac
gcgtcgggagacgacactcaggtcgatacgtcgctgttcaccgtgtcggctccagctgtt
gctgctgatgccacgctcaacaacgccggccgaatcgatggggatgcgaccgttgcagcg
ggcttcggcaacgctacggccaccatcaccggcactgttggcggttcggtgaacgccagc
gcgttcgcgtccacgtcgagcagcggttccacctcggactacagcgtcaatggcggcctc
aacacgctgacgtcgcaaaccttcactgacagcttcgccgatgccggtggccaggccaat
gtcgtgatcgacacggccgctgcgctgcagggcaagggcgtgcctagcgttgcaggcaat
gtctttgcgtcgggcgtcgggggcgcctccatcacggtcgaagacggcagcgttgtcggt
gatgccgggacgggtacgggtggcaatctgttcgccaacagcctgggcgaaagcagcagc
gatgagacggtcacgacctacgctgcggacggtttcacgcccgccacagttgcgtcgacc
ttcagcgctgccgcagtaggcggcgcggcttcggtcaccaacaacggcaccgtccttggc
gatgtcgaggttcaggggctgacgtccgcttcgctcgtcaacaatggcgatctgggcacc
ggcggcaatctgttcagcgtttcggctctggacgccgacagcactgttacgttgaccgac
accaaccccaccaacgctggcatccgttccctcgcggcgacggttgcggcaatgcctgtg
ggcggcaacgccagtttcaccaacagcggcaacgcctttggtgacgtcgaactcgaaggt
gtgacgggttcgttcatcaacaatggcatcctgaccggcaccaccacccttggcggttcg
gtgttcagcggatcggccacggtcgatgcgacgatcaacaccaccaacgtgaccgtgact
tcggttgccgcttcgcagacctacactgtcgatcagaacggtgtttcgggtggcttcgct
gtaacgggtgcggtttccacgcagagcgaggtggcgtccgcgctgtcttcgctgctttcg
ccagcggtgccactcgatgcctcgcaggtcgatccggctgcgttcaacctgaccgtgggt
ggcgaggctgccgtcaagactgctgccatcaagtcgacgatcaacctcaacaatggttcg
atcacgcttggcgacatcgacgcacagcgtgacgatagcggcgccttcctcaccgacacg
accgtcaacctgaatggcagcggtttcctgggcgcgagcgaactgcgttcggctacctcg
acctcgcctgccatcttcacgccggccgccacgctgccggaagaagctgaaggcctgttc
ggcccgaccgccgtccgcgtcctgggcgtcaacacggtcaacaagaccggtgcaggcacc
ttcgtcgtaacgggcgccgaatatgttccggctgaaggggctgccccggcagcttggacg
atggatgtcggcaacttcaacgtgcaggctggcgaagttcagctggacgttgatggcacc
gacgccgtgttcggcatcaagggcaacatcaacaatgatgctaccctggtcctcggccgt
cgtgcaccgaccttcgttcagacggttggcaacagcatcgtcacgccgggacccgaagcg
atcaagggcattgagctctatcagcagggcaactacacccagactgccaacggtacgacg
gttgtgggcgtcaatccctcgctggtccgctttggcaacctgtccgtcaacgatggcggc
gcagcgcccgaggtgctgggtccgatcactggcggcgtcagtgttccctacttcaccacc
ccgaccaatgccggtgtcttctcgatcccgtcgtcggtcactgtggacggtaacctgaac
ctggccggcaaggtcgcggtgacggtgtcgaaggatagcctctattcgacgggcgatggc
tatacgctcttcacctataccggcaccggcaacgtcaccgccacggcggcgccgacgctg
gcctcgcagttcgtgaccttcggcctgaagcatgatgcgaccgccaagaccgtttcgatc
gaggcgacccgcaacagctacgccacgggcgcaaccaatcccaatgccgcttcggcagcc
gtgggtctggacagcgcgctggctgacgtcatcgcccgggtgaagacggacgccgctggc
ggcaatggctttgcttcggttacggagatcgccaatgcgcaggacatcgccaacatcgca
gcgggtctcgactggcgcctgaacagcgcacaggcggcgcaggtcttcaacgagctttcc
tcggcggagatctatggttcgctggccgcggttgatcagaacgcggttttcaacaccacc
gtcaaccgtctggctgctcgccgtggctatggtgaggcgctgggcacgcagatctggttc
aatccgtcggcgaacttcgccaagacgggcggcaccagctcgggtgcgtcgaagatcaag
accaacagctatggcggcgcctttggtctcgacgtggcctatcaggaagacggcgccttc
ggcatcggcttcggctatggccagcatgacgtcactgcgcagggttcgcaggaagatgcc
caggttcgcacctacaccatcggtgcctatgcgacccagggctttggccccttctacggc
agcttccagctggcgtacggcttctcgaaatttgaagtcgaacgcgacctggacatcctc
gctcgcaccattgaagccgacttcaagggcaaacagttggatgccagcctggaactgggc
tatgactttgccgccggtagcggtctggtcgtgaccccttatggtaagctggcgctgcgt
cgctggtcgatgaacggcttcactgaagaaggtggtgctggcatcggattgaacgtggat
cacgcctccaagaccgtcttctcgcccgttctgggtgtgaaggccggggctctgctcggt
gatgccgatgggatcgcctatcgcccctatgccaaggtccagtacagcttccagggcagc
atcggcagcgatcgcacggtccagtatctgggcggcggcgatgccttccgcctgaagggt
gtggatccggacggtaacgggctgatcgaactgggtatcgatgcctcggtcaacaagcgc
gtcaacctgttcctctctggcggttacggcttcggtggccataacagcctcggccaggtc
cgtggtggcattagcttcggcttctga
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