Sphingobium sp. JS3065: NUH86_21105
Help
Entry
NUH86_21105 CDS
T10812
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spjs03000
]
NUH86_21105
Transcription factors [BR:
spjs03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NUH86_21105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
TrmB
HTH_36
HTH_Crp_2
HTH_5
Fe_dep_repress
HTH_34
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-ProteinID:
UZW57224
LinkDB
All DBs
Position
2:complement(810453..811265)
Genome browser
AA seq
270 aa
AA seq
DB search
MKPEDRNPYKDVRSLVRGLRVIEMLSELGWAKVGELSAAAGIQRSSAYRLVNTLEQLGYV
TRRSDDGAVALTTKFAYLADALKDDDIVTQFAWPSLFELSKDVLWPCDFASFEGGKVLIR
LSTHKISPMSIHRGMVGKERYLMRSALGLAILSGMAEDELESSLSIIERMGGSNAEDVRN
RETLHRTLDTVRARGYASSAGQTEAKISAIAMPVRSAQERVAGAVNIVFFRSVMTTEQAA
DRYLEKLRMCVREVERSLKDFAERNSIAGD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagaggatcgcaatccatacaaagacgtccgatcgcttgtccgcggcttgcgt
gtgatcgagatgctgagcgagctcggctgggctaaggttggcgaattgagtgctgccgcc
ggcatacagcgctcgtcggcctaccggctcgtgaacacgctcgagcagctgggctatgta
acgcgtcggagcgacgacggcgcggtcgccctgacgacgaaatttgcctatctcgccgac
gctctcaaggatgacgacatcgttacccagttcgcatggccatcgctgttcgaactctca
aaggacgttctgtggccttgcgacttcgcgagcttcgagggcggcaaggtcctgatccgg
ctttcgacgcacaagatcagccccatgtcgatccatcgagggatggtcggcaaggagcgt
tatctcatgcgatccgcgctcgggctcgctattttatccggaatggccgaggacgaactg
gaatcgtcgctctcgatcatcgaacgaatgggcggctccaacgccgaggacgttcgcaat
cgagagacattgcaccgtacgctcgatactgtccgcgcccgcggttacgcgagctcggcg
ggccagacagaagccaagataagcgccatcgcgatgccagtccgttcggctcaggagcgt
gtcgctggcgccgtgaacatcgtattcttcagaagtgtcatgacgaccgagcaggccgcg
gaccgttatcttgagaagctcagaatgtgcgtgcgagaggttgaacgttcgctaaaagat
tttgcggagcgaaacagcatcgccggagattga
DBGET
integrated database retrieval system
