Sphingobium sp. JS3065: NUH86_21420
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Entry
NUH86_21420 CDS
T10812
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjs02000
]
NUH86_21420
Transporters [BR:
spjs02000
]
Other transporters
Pores ion channels [TC:
1
]
NUH86_21420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UZW57280
LinkDB
All DBs
Position
2:875888..877912
Genome browser
AA seq
674 aa
AA seq
DB search
MSAFSLLRGVSLCALACSFSAPALADEAAEQSRIIVTASPMVEEAAERLLRTPGGVGVVP
AEAFGDRLAVSLRDALSFSPGVYTQPRFGQEVRISIRGSGLSRGFHMRGLTLLQDGIPIN
MADDNGDFQELDPQVFQHLEVYRGGNALRLGGSTLGGAINAVTPTGRTAPGAEMRVDGGS
FDTLRGKAAYGYSDGRGDAWAALTADRSDGDRDHGRRRALRFNGNVGLKLNDRVETRFYA
SVQTIRQKLSGALNEGDALDHPAKGNFAGDQARNIDSIRLQNRTTVALDGGELAFGLYYN
AKALDHPIFQVVDQKSEDRGVFASLDLAGNIGGVPVELTLGGQARFGQGRFRQFVNLNGK
AGAPRSYQRARAQTINSYGEVRVAPVAGLWLIAGGIYSHGERRLDNRFAPAASGDVSFDA
FAPKFGLLFEPAQAVQFYANYSRSVELPGFIELGQTQFDTLAVGFVPLRTQKAWTAEIGA
RGTRGMAHWDISLYRADLRGELLQYGAGDSAIPAATFNAGRTRHQGVEAGLDLALTPWAS
LRQVYQYSDFRFREDAHFGDNRLPVVPRHFYRAELKLGTEKLSVSPAVEWLPQGAWVDYA
NTKRVGDYATLNLGAQAQVKPGVTLFLDARNLTAERAVGDISAVVDYSKLAPASRAIFYP
IERRAFYGGVRARF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctttttcccttctgcgcggcgtttcgctgtgcgcgcttgcctgttccttttcc
gctcccgccctggccgatgaagcggcggagcagagccggatcatcgttaccgccagtccc
atggtcgaggaggcggcggagcggctgctccgcacgccgggcggggtcggtgtcgtgcct
gccgaggcattcggcgaccggctggccgtttccctgcgcgatgcgctgagcttctcgccc
ggcgtctatacccagccgcgcttcgggcaggaggtgcggatttccattcgcggatcgggc
ctgtcgcggggttttcatatgcgcgggctgacgctgttgcaggacggcattccgatcaac
atggccgacgacaatggcgatttccaggaactggacccgcaggtcttccagcatctggag
gtgtatcgcggcggcaatgcgctgcggctgggcgggtcgacgctgggcggggcgatcaac
gcggtgacgccgaccgggcggacggcgccgggggcggaaatgcgggtcgacggcgggtcg
ttcgacacgctgcggggcaaggcggcctatggctatagcgacgggcggggggatgcgtgg
gccgcgctgaccgccgaccggtccgatggggaccgggatcatgggcggcgcagggcgttg
cggttcaacggcaatgtcgggttgaagctgaatgaccgggtggagacgcgcttctatgcc
agcgtgcagacgatccggcagaaattgtcgggggcgctgaacgaaggcgatgcgttggac
catccggccaagggcaatttcgccggggatcaggcgcgcaacatcgattcgatccgcttg
cagaaccggaccacggtggcgctggacggcggggaactggcgttcggcctctattataac
gccaaggcgctggatcatccgatctttcaggtggtcgaccagaagtcggaggatcgcggg
gttttcgccagcctcgatctggcggggaatatcggcggcgtgccggtcgaactgacgctg
ggcggacaggcgcggttcgggcaggggcggttccgccagttcgtcaatctgaacggcaag
gcgggcgcgccgcgatcctatcagagggcgcgggcgcagacgatcaacagctatggcgag
gtgcgggttgcgccggttgcggggctttggctgatcgcggggggcatatacagccatggc
gagcggcggctggacaatcgtttcgccccggcggcgagcggggacgtgtcgttcgacgcc
ttcgcgccgaaattcgggctgctgttcgaaccggcgcaggcggtgcaattttacgccaat
tacagccggtcggtggaattgccgggcttcatcgaactggggcagacgcagttcgacacg
ctggccgtcggtttcgttccgctgaggacgcaaaaggcgtggacggcggagatcggcgcg
cgcgggacgcggggcatggcgcattgggacatcagcctctatcgcgccgacctgcgcggc
gagttgctgcaatatggggcgggcgacagcgcgattcccgcggcgaccttcaatgcgggg
cggacgcggcatcagggggtcgaggcggggctggacctggcgctgaccccctgggcgagc
ctacggcaggtctatcaatatagcgatttccgcttccgcgaagacgcgcatttcggggac
aatcgtctgccggtggtgccgcgccatttctatcgcgccgaactgaagctggggacggag
aagctgagcgtctcgcccgccgtggaatggctgccgcagggggcgtgggtggattatgcc
aacacgaagcgggtcggggattatgcgacgttgaacctgggcgcgcaggcgcaggtgaaa
ccgggcgtcacgctgttcctggatgcgcgcaacctgacggcggaacgggctgtgggcgat
attagcgcggtggtcgactattcgaagctggcgcccgcgtcccgggcgatcttctatccg
atcgagcggcgcgccttctatggcggcgtgcgggcgcggttctga
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