Sphingobium sp. JS3065: NUH86_22745
Help
Entry
NUH86_22745 CDS
T10812
Symbol
traC
Name
(GenBank) type IV secretion system protein TraC
KO
K12063
conjugal transfer ATP-binding protein TraC
Organism
spjs Sphingobium sp. JS3065
Brite
Secretion system [BR:
spjs02044
]
Type IV secretion system
Conjugal transfer pilus assembly protein
NUH86_22745 (traC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UZW58088
LinkDB
All DBs
Position
pNIN1:153113..155698
Genome browser
AA seq
861 aa
AA seq
DB search
MAQKGLVERAMAGLLGWMGRPDAERPAIGVPMLAHWLPYRSYDAKSGIFYNSASRGFVLE
MAPMVGADERSGEILTQFLSEAIPTPGCLQFHQWMSPRVSELLSKWYIPRYRARGLYEQM
ARHRIALMTQGVWSSLSADAPFFLRNHRVAVSYSTPENSKVSNEDIAGVMDGLVSALASI
NVSARKMDPAALIAWIDDITSPTTAPGEDAVSYNPFDSIADQAIRRDIEMRVEADRILLR
TERFRPTGRELDDTPEIGEIYPDCFDVRAFSVRNLPQHWAPWDVARLIGDMFTDKLRMPC
PVSTNLCIDFPDAEAAASRAGFKYMRTTSLADSRSARFLPQLKEQSREWAHVNDEMKQGR
KLVRLFYSVTSFSPHGRGDAHERILKSVYRAAGWDLLDDRYLQVMGLLCAMPMTMANGLS
KDLERMKRMRTMLTTTAANLAPLQGEYLGGAIPHMLLIGRRGQPFFWSPFENRAGNHNVA
VFGKSGSGKSVALQELCASLCGAGARVVVIDDGRSFEHSARLQGGAFVEFTMSAGFCLNP
FSMIDEAQAARDEDYLLDCMAMLKAIVNQMARHIDKLNDTERGLIDGAVNRVWEEKGRAG
SIDDVIAALDATDNQMARDLGIAMGPFSSRGTYGKFFEGEVSFELSASLTVFELSDLSSR
EELRSVVLTAIMFLSQQMMRKVDRAIPKALLLDEAWQMLRGGAMADFIETYARTCRKYGA
SLVTATQSLNDYYKSAGSIAALENSDWFFILQQKPETIADFKKHDRFEMDDYTDALLRSL
KRNGFEYSDILIKGPETLALGRLVLDPYSAALFSSSPDTFAAIEQMVGQGMSMEQAIERV
AFPDDPEKWSAAAPGAALAAE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggtcttgtggaaagggcgatggccggtctgttgggctggatgggccgt
ccggacgctgagcgaccggcgattggcgtcccgatgctggcccattggcttccctatcgc
agctacgacgcgaaaagcggcatattctacaacagcgcctcacgcggcttcgtgctcgaa
atggcgcccatggtcggggctgacgagcgcagcggcgagattttgacgcaatttctctcc
gaggcgatccccactcctggctgccttcagttccatcaatggatgagcccgcgcgtcagc
gagctgctttcgaaatggtatatcccccgatacagggcgcgcgggctctatgagcagatg
gccaggcatcgcatcgcgctgatgacgcagggtgtctggtcttcgctctcggccgacgca
cctttcttcctgcgcaatcaccgcgttgccgtctcctattcgacgccggaaaattcaaaa
gtatccaatgaggacattgccggtgtcatggacggcctggtgtccgcgctcgcctccatc
aatgtgagcgcccgcaagatggaccctgcagccctcatagcctggatcgacgacatcacc
tctcccacgacggcaccgggagaagatgccgttagttacaatcccttcgacagcatcgcc
gatcaggcgatccgccgcgacatcgagatgcgggtggaggcagaccggatattgctgcgc
accgaacgctttcgcccaacgggccgggaactcgacgacacgcctgaaatcggtgaaatc
tatcccgattgcttcgacgtacgcgcattttccgtgcgcaatctgccccagcattgggcg
ccctgggatgttgcccggctgatcggggacatgttcaccgacaagctgcgtatgccttgc
cctgtctcgaccaatctttgcatcgactttcccgatgccgaggccgctgcgagcagggcg
ggcttcaaatatatgcgaacgacgagcctggcggacagcagatcggcgcggttcctgccg
cagcttaaggaacagagccgggaatgggcgcatgtgaatgatgagatgaagcagggacgc
aagctggtgcgcctcttctactcggtgacatccttctcgccgcacgggaggggcgatgcc
catgaacggatcctcaaatccgtttatcgcgctgccggctgggatctgctcgacgaccgc
tatctccaggtcatgggccttctttgcgccatgcccatgaccatggccaatggactgtcg
aaggatctggaacgcatgaagcgcatgcgcaccatgctgacgacgacagccgccaacctt
gcccctctgcagggagaatatctcggcggagcgatcccccacatgctcctgatcggccgg
cggggccaacccttcttctggagtccgttcgaaaacagagcgggcaatcacaatgtcgcg
gtgttcggaaaatcgggctccggcaagtcggtcgcgttgcaggagctgtgtgcctcgctg
tgcggcgcgggcgcgcgcgtggtggtgatcgacgatggccgctcctttgagcattccgcc
aggctccagggtggcgccttcgtcgaattcacgatgtccgccggcttttgtctcaatccc
ttcagcatgatcgatgaagcccaagcggcgcgagacgaggattatctgctcgattgcatg
gcgatgctcaaggccatcgtcaaccagatggcgcgtcacatcgacaagctgaacgatacc
gagcgcggactgatcgatggagcggtcaaccgtgtgtgggaagagaaggggcgagccggg
tccatcgatgacgtcatcgccgcccttgacgcgaccgacaatcagatggcgcgcgatctt
ggcattgccatggggccgttctcctcgcgcgggacatatggcaaattcttcgagggagag
gtctcgttcgaactgtcagcgtcgttgaccgtgttcgagctgtccgatctttcttcgcgc
gaggaactgcgcagcgtcgtgctgacggcaatcatgtttctttcccagcagatgatgcgc
aaggtggatcgcgccattcccaaggcgctgctgctcgatgaagcctggcagatgctgcgc
ggcggagcgatggccgatttcatcgaaacctatgcgcgcacctgccgcaaatatggcgca
tctctggtgacagcgacgcagtcactcaacgattattacaaatcggcgggctcgattgct
gcgctcgagaatagtgactggttcttcattctgcagcagaagccggagaccatcgccgat
ttcaagaagcatgatcgcttcgagatggacgattacacagatgccctgctgaggtcgctt
aagcgcaacggttttgaatattccgatattttgatcaagggccccgagacattggccctc
ggacgcctggttcttgatccttattcggccgccctgttctcgtccagtcccgatacattt
gccgcgatcgagcagatggtcgggcaaggcatgagcatggaacaggcgatcgagcgcgtc
gcctttcctgacgatcctgaaaaatggtcggcggcggcgcccggcgccgcgcttgctgcg
gagtag
DBGET
integrated database retrieval system
