Sphingobium sp. JS3065: NUH86_23055
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Entry
NUH86_23055 CDS
T10812
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spjs Sphingobium sp. JS3065
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spjs03032
]
NUH86_23055
03036 Chromosome and associated proteins [BR:
spjs03036
]
NUH86_23055
03400 DNA repair and recombination proteins [BR:
spjs03400
]
NUH86_23055
DNA replication proteins [BR:
spjs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NUH86_23055
Chromosome and associated proteins [BR:
spjs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NUH86_23055
DNA repair and recombination proteins [BR:
spjs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NUH86_23055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
UZW57887
LinkDB
All DBs
Position
pNIN1:complement(218875..219150)
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AA seq
91 aa
AA seq
DB search
MTNGDLADLLASETGSTKADARKTVDIVFAAIVAASVRGEEVSLGGFGKFKVKELSAREG
RNPATGETIKIAASKKLTFSPAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacggtgatcttgcagaccttctcgccagcgaaaccggttccacaaaagccgat
gcccgcaagacggtggatatcgtgttcgccgcgatcgtcgcagcctctgtcagaggcgag
gaagtgagcctcggcggctttggaaaattcaaggtgaaggagctatccgcccgtgaaggc
cgaaatccagcgaccggcgagaccataaaaatcgccgcctcgaagaaacttaccttctct
cccgcgaaggcggtcaaagacaaactcaacggctag
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