Sphingobium sp. JS3065: NUH86_24305
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Entry
NUH86_24305 CDS
T10812
Name
(GenBank) LuxR family transcriptional regulator
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NUH86_24305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spjs03000
]
NUH86_24305
Transcription factors [BR:
spjs03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NUH86_24305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UZW58307
LinkDB
All DBs
Position
pNIN3:57759..58502
Genome browser
AA seq
247 aa
AA seq
DB search
MIGLGQVQDFCAVAATIKDSRALAGLMAEITREMGFRYFALVHHIDRKPAVSPVHIVDYP
PDWVERFQARRLYASDPIHRASHRTNVGFAWSAVQSLITLSAADRSILAEAHNAGLGDGF
TVPAHIPGEVNGSCSFAMGSGDVLDQRQLPLVQLIGSFAFEAARRLSRQTQARCEGPSLT
ERQAECVALVARGKTDWEISQILGIGQETVIQHVKDARDRYGVTKRTLLAIRALFDGQIS
FADVFGR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcttggccaagttcaggacttctgcgcggtcgccgcgacaatcaaggacagt
cgagcgctcgccggcctgatggccgagatcacgcgtgagatgggttttcggtactttgcc
ctggtccaccatatcgaccgcaagccggcggtgagccctgtccatatcgtcgattatcca
ccggactgggtggagcgtttccaggcgcgtcgcctctatgccagtgacccgatccaccgt
gccagccaccgcaccaatgtcggctttgcctggtcggcggttcaatcactcatcacgctc
agtgctgctgatcggtcgatcctggcggaagcgcacaacgccgggctgggcgatggtttc
acggttcctgcccacattcctggtgaggtaaatgggtcctgctcattcgccatggggtca
ggcgacgtgctcgatcaacgacagctcccgctcgtccagctgattggcagcttcgcattc
gaagctgcgcgcagattgtcccggcaaacccaagctcgatgcgaaggccccagcctgact
gagcggcaggctgaatgtgtggcgctggtcgcgcgcgggaagaccgactgggagatcagc
cagatcctcggcattgggcaggaaacggtgatccagcatgtcaaggatgcgcgtgaccgc
tacggtgtcacgaagcgcacgcttctggcgatccgcgccttgttcgatggacagatcagc
ttcgcggatgttttcggccgatga
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