Sphingomonas sp. KC8: KC8_01630
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Entry
KC8_01630 CDS
T04987
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spkc03016
]
KC8_01630
Enzymes [BR:
spkc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
KC8_01630
Transfer RNA biogenesis [BR:
spkc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
KC8_01630
Prokaryotic type
Methylthiotransferases
KC8_01630
SSDB
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ARS25995
LinkDB
All DBs
Position
complement(320488..321822)
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AA seq
444 aa
AA seq
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MSGPELITLGCRLNIAESEAMRSLAGDADDLVIVNSCAVTAEAVRETRKAIRRAHRARPD
ARIVVTGCAAQIEPETFAAMPEVTRVIGNADKLNASAFYFPSPPSSQRKVGSQEMESARQ
PHEIPAFAGMTDETAEVRVSDIFAVRQTAPHLAAAFAEHARAFVEVQNGCDHRCTFCVIP
YGRGNSRSVPAGIVVDRIKALADAGHREVVLTGVDLTSYGPDLPGGPSLGLLVERILRHV
PRLERLRLSSLDSVEIDDRLFDIVTGDTRVMPHLHLSLQAGDDMILKRMKRRHSRAEAVG
VVERLKSRRPEIAIGADLIAGFPTEDEAMAANTRALIDDCDIVFGHIFPYSPRAGTPAAR
MPQIDATVIRERAKALREAANRRRSAWLDSLAGTVQHVLVERDGETGHAENFARVRLGSA
VAPGTIVPVRITGRTQETLIAEAA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggccccgagctgatcacgctcggttgccggctcaacatcgccgaaagcgaagcc
atgcgttcgctggcgggcgatgcggatgatctcgtcatcgtcaacagctgcgcggtgacg
gccgaagccgtgcgcgaaacgcgcaaggccatccgccgcgcccaccgcgcccggcccgac
gcccgcatcgtggtgacagggtgcgccgcccagatcgaacccgagacatttgcggccatg
cccgaagtgacgcgggtgatcggcaatgcggacaagctgaacgccagcgcgttctacttc
ccctccccaccgtcatcccagcgcaaggtgggatctcaggagatggaaagcgcccgccag
ccgcacgagatcccggccttcgccgggatgacggatgaaaccgccgaagtccgcgtgtcg
gatatcttcgccgtacgccagaccgcgccgcaccttgccgcggccttcgccgaacatgcc
cgcgccttcgtcgaggtgcagaatggctgcgatcaccgctgcaccttctgcgtcatcccc
tatggccggggaaatagccgttcggtgcctgccggcatcgtggtcgaccggatcaaggcg
ctggcggacgccggccaccgcgaagtggtgctcaccggggtcgatctcaccagctatggc
cccgatctgcccggcggacccagcctcggcctgctggtcgaacgcatcctgcggcatgta
cccagacttgaacggctgcgcctgtcctcgctcgattcggtcgagattgatgatcggctg
ttcgatatcgtcaccggcgatacgcgggtgatgccgcacctccacctttcgctgcaggcc
ggcgacgatatgatcctcaagcggatgaagcgccgccatagccgcgccgaagccgtgggc
gtcgtcgaacggctgaaaagccgccgccccgaaatcgcgatcggcgccgatctgatcgcc
ggcttccccaccgaagatgaggcgatggccgccaacacccgtgcgctgatcgacgattgc
gacatcgtgttcggccacatctttccatattcgccccgcgccggcacgcccgctgcgcgc
atgccacagatcgacgccaccgtgattcgcgaacgtgccaaggccctgcgcgaagccgca
aaccgccgccgctccgcatggctcgacagcctggccggcaccgtccagcatgtgctggtc
gagcgtgatggcgaaaccggccacgccgaaaatttcgcacgggtgcgcctcggctcggcc
gtcgcccccggcaccatcgtccccgtccgcatcaccgggcggacccaagaaacgctgatc
gcggaagctgcatga
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