Sphingomonas sp. KC8: KC8_01680
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Entry
KC8_01680 CDS
T04987
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spkc03032
]
KC8_01680
03036 Chromosome and associated proteins [BR:
spkc03036
]
KC8_01680
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_01680
DNA replication proteins [BR:
spkc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KC8_01680
Chromosome and associated proteins [BR:
spkc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KC8_01680
DNA repair and recombination proteins [BR:
spkc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KC8_01680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
GTP_EFTU_D2
HU-CCDC81_euk_1
DUF2267
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
ARS26004
UniProt:
A0A1X9YB40
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All DBs
Position
331944..332216
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AA seq
90 aa
AA seq
DB search
MNKQELIGSVAEASGLSKNDASKAVEAVFDAISGVLKKGDEVRLVGFGTFSVSKRKASTG
RNPRTGEPMKIKASSQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaagaactgatcggatctgtcgcggaagcgtcggggctcagtaagaacgat
gcttcaaaggctgtggaagccgtgttcgacgcgatcagcggtgtcctcaaaaagggcgat
gaagtacgcttggttggcttcggcaccttttcggtttccaagcgcaaggcgtccaccggc
cgcaacccgcgtaccggcgaaccgatgaagatcaaggcatcgagccagcccaagttcaag
gcgggcaagggcctgaaggacgcggtcaactga
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