Sphingomonas sp. KC8: KC8_03255
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Entry
KC8_03255 CDS
T04987
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_03255
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_03255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARS26308
LinkDB
All DBs
Position
687928..690165
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AA seq
745 aa
AA seq
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MSIRHPHAMRALLMLSVCSTAVALPTAAYAQDAVEAAAANDGDIVVTARKREEKLQDVPI
AVTAVSQANLDSRGFDAVTDVQQIAPNLNFTPGQGGNSGGIAAFVRGVGENDFIITADPA
VGLYIDGVYIARTFGATTELLGIDRIEVLRGPQGSLFGKNTIGGAINVVSHVPDGTSVVQ
ADLRYGSYNTVRARANVEGALSDSLSLGISALGEFGEGWQKIPSGKNLGNKNVVAGRVTL
HYDAAPFDAVLTVDGLRRRQNSAPHSMLAFDPNAPFAGLQNTFLSPCCTVPGRIDRTDTN
AELNRDDTDSANAALTLSYDIGAGTLKSISAYRWVSAVFGRDGDASSTVNYAGDIHDETA
RQFSQELQYATPLFGDRGNLLVGAYFFREKTRDDTRLIVADGLYDAMIAAGVPAAGAEAA
DFNINFFNRQKTTNYAAFGNFTYDLTDALAVELGGRYTWEKKTFSQRSIRVGNGSNLVMP
YTLTKDWDAFSPRASVSYKFQPNLLGYASWSKGFRSGGFNGRPTAEIEIGSYDPEHLTAY
EVGIKSNFGPVMINLAAFRNEYKDQQVLVNKTNLNVGYENAGKSRIQGIELEYDARITPR
FRVSGSLGLLDAKYLEFATVINGTAIDLTGRKLKQAPEITGSLSLVYTAPITDTLDATFR
ADSTYRSLTYLDVENSPLRSPDYATVNLSADFDLPWQGTSLRFAVDNVTDKQVLIAGFDG
TAGFGFREGFFSDPRRYSVTFSIRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccgtcacccgcacgcgatgcgggccctgctcatgctgtccgtgtgcagcacc
gccgttgcgctgccgaccgcagcttacgcccaggatgcggttgaagccgctgccgccaac
gatggcgacatcgtcgtcaccgcgcgcaagcgcgaagaaaagctgcaggacgtgccgatt
gccgtcaccgcggtgagccaggccaatctcgactcgcgcggcttcgatgccgtcaccgat
gtccagcagatcgcccccaacctgaacttcacccccggccagggcggtaacagcggcggc
atcgcggcattcgtgcgcggcgttggcgaaaacgacttcatcatcaccgccgatccggcg
gtcggcctctatatcgacggcgtctatatcgcccgcaccttcggcgcgacgaccgaacta
ctcggcatcgaccgcatcgaagtgctgcgcggtccgcagggctcgctgttcggcaaaaac
accatcggcggcgcgatcaacgtcgtcagccacgtgcccgacggcaccagcgtggtgcag
gccgacctgcgctacggttcgtacaacaccgtccgcgcccgcgcgaacgtggaaggcgcg
ctgagcgacagcctgtcactcggcatctcggccctcggcgaattcggcgaaggctggcag
aaaattccatcgggcaagaacctcggcaacaagaatgtcgtcgccggccgggtgacgctg
cattacgacgccgccccgttcgacgcggtcctcaccgtcgatggcctgcgccgccgccag
aattcggccccgcactcgatgctggcgttcgatccgaatgccccgttcgcagggctgcaa
aataccttcctcagcccgtgctgcacggttcccggccggatcgaccggaccgacaccaac
gcggaactgaaccgtgatgacacggattcggccaacgccgctctgacgctgtcctacgac
atcggcgccggcacgctgaaatcgatcagcgcctatcgctgggtcagtgcggtgttcggt
cgcgatggcgacgcgtcctcgacggtcaactatgccggcgacatccatgatgaaaccgcc
cggcagttcagccaggaactgcaatatgcaaccccgctgttcggcgatcgcggcaacctg
ctcgtcggcgcctatttcttccgtgaaaagacgcgcgacgatacccgcctgatcgttgcc
gacggcctttatgacgcgatgattgcagccggggttcccgccgcaggtgccgaagcggcc
gatttcaacatcaacttcttcaaccgccagaaaaccaccaactatgccgcctttggtaat
ttcacctatgatctgaccgacgcattggcggtcgaactgggtggccgttacacctgggaa
aagaagacctttagccagcgttccattcgcgttggcaacggatccaatctggtcatgccg
tatacgctgacaaaggattgggatgcgttcagcccgcgcgcatcggtgagctataagttc
cagccgaacctgctgggttatgcgtcctggtcgaagggcttccgcagcggcggtttcaac
ggccgcccgaccgccgaaatcgagatcggttcctacgatcccgaacatctgaccgcctat
gaagtgggcatcaagagcaatttcgggccggtgatgatcaacctcgccgcgttccgcaac
gaatataaggatcagcaggtcctggtgaacaagaccaacctgaacgttggttacgaaaat
gccggaaaatcgcgtattcagggcatcgaactggaatatgatgcacgcatcaccccgcgc
ttccgtgtcagcggttcgctcggcctgctggatgcgaagtatcttgaattcgcgacggtc
atcaacggcaccgcgatcgatctgaccggacgcaagctgaagcaggccccggaaatcacc
ggcagcctcagcctcgtctacacggctccgatcaccgatacgctggacgccaccttccgc
gcggacagcacctatcgcagcctgacgtatctcgacgtcgaaaattcgccgctgcgttcg
ccggattatgcaacggtgaacctcagcgccgatttcgatctgccatggcagggcacgtcg
ctgcgtttcgcggtcgacaacgtcaccgacaagcaggtgctgatcgccggcttcgacggc
accgccggattcggtttccgcgaaggcttcttcagcgatccgcgtcgctactcggttacc
ttctcgatccggcgttaa
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