Sphingomonas sp. KC8: KC8_04525
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Entry
KC8_04525 CDS
T04987
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_04525
Enzymes [BR:
spkc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KC8_04525
DNA repair and recombination proteins [BR:
spkc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KC8_04525
Prokaryotic type
KC8_04525
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ARS26554
UniProt:
A0A1X9YCQ4
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All DBs
Position
complement(931142..932512)
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AA seq
456 aa
AA seq
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MTSILWFRQDLRLADQRALVAAASEGPVVCLYVLDDERPGPWRIGGAQRWWLHHSLSALA
DALVDRGAQLILRRGDAVEEVLRLACEVGAARVHALRHYEPWWQDAEAALADRIDLHLHD
GGTLAPPDRVRTGGGGRYRVFTPFWRALKEQMPPELPLPAPDRIATVADHPDSDALDDWA
LLPTAPDWAAGFGDYWAPGEEGAKDALRNFLPNITDYDTARNLPSIAGSSRLSPHLHFGE
ISPATVWHHAAKRARGEAEPFLREVGWRDFAANVIDILPDYGRRNGREAWDDFPWRDAEA
DFAAWTKGRTGYPIVDAGMRELWATGWMHNRVRMIAASFLTKHLLIDWRRGERWFWDTLV
DANYANNAVNWQWIAGTGIDSNPFGRIMAPILQSEKFDAAAYIRKWVPELAKVPEPWIHD
PHEAGCAPKGYPAPLIGHRAGRARALATAEAHGRGG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtatcttatggttccgtcaggatttacggcttgctgaccagcgcgcgctggtg
gcggcggcgagcgaaggcccggtcgtctgcctttatgttctcgatgacgagcggcccggg
ccgtggcggatcggtggggcgcaacgctggtggctgcaccatagcctgagcgcgcttgcc
gatgcgttggtcgacaggggcgcccagctgatcctgcggcgtggcgatgccgtggaagag
gtgctgcggctggcgtgcgaagttggcgccgcgcgtgtccatgcgctgcgccattatgaa
ccatggtggcaggatgccgaagccgcgctggcggaccggatcgacctgcacttgcacgat
ggcggcacgctggccccgccggatcgggtgcggacgggcggtggcggccgttatcgggtg
ttcacgccgttctggcgcgcgctgaaggagcagatgccgcccgaactgccgctgccggcg
ccggaccggattgcgacggtggccgatcaccccgatagcgatgcactcgacgactgggcc
ttgctgccgaccgcgccggattgggccgccggatttggcgactattgggcacccggtgaa
gagggcgcgaaggatgcgctgcgcaacttcctgccgaacatcaccgactatgatacggcc
cgcaacctgccgtcgatcgccggatcgtcgcgcctgtcgccgcatctgcatttcggcgaa
atttcgccagccaccgtgtggcaccatgccgcgaaacgcgcgcgcggcgaggccgaaccc
ttcctgcgtgaagtgggctggcgcgatttcgccgcgaacgtgatcgatatcctgcccgat
tatggccggcgcaacgggcgcgaggcgtgggacgatttcccatggcgcgatgccgaggcg
gatttcgcggcgtggacgaaagggcgcacgggctatccgatcgtcgatgccggaatgcgc
gaattatgggcgaccggatggatgcacaatcgggtgcggatgatcgccgcatccttcctg
accaagcatctgctgatcgactggcggcgcggcgaacgctggttctgggatacgctggtc
gatgccaattacgccaataatgcggtgaactggcagtggatcgcgggaacggggatcgat
tccaatccgttcgggcggatcatggcgccgatcctgcaatcggaaaaattcgacgcggcg
gcctatatccgcaaatgggtgcccgaactggccaaggtgcccgaaccgtggatccacgat
ccccacgaggccggttgcgcgccgaagggctatccggccccgctgatcggccatcgcgcg
gggcgggcaagggcgctggcgacggcggaggcccatggccgtggcggatga
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