Sphingomonas sp. KC8: KC8_04990
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Entry
KC8_04990 CDS
T04987
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spkc03019
]
KC8_04990
Messenger RNA biogenesis [BR:
spkc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KC8_04990
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_16
T2SSE
AAA_29
Rad17
Integrase_1
CoaE
AAA_30
ZSWIM1-3_C
ABC_tran
FtsK_SpoIIIE
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ARS26644
UniProt:
A0A1X9YCY6
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All DBs
Position
1027788..1028735
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AA seq
315 aa
AA seq
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MTVASRPRHILLVTGMSGAGKSTALNTFEDMGWEVVDNLPLSLLNRLLGTPLPEGADDGS
RPLAFGIDSRTRGFDAGAIVRTIRQLRDERGDDIEVLFLDCSGAELQRRYSETRRRHPLA
LDRPAADGIARERELMADLRQSADLVVDTTETTTNALQRELRQHFGGAETDQPTLTVMSF
GFSRGVPRNADLVFDMRFLRNPHWDEVLRPLTGLDAAVGDYIAEDPAYEAAVSRIEELLL
LLLPRYAAEGKSYVTVAFGCTGGRHRSVHVTERVAARLRGAAFSPNVSHRDLASAPHDSL
ERMPNNGAKQISSGG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcgccagccggccacggcacatccttctcgtcaccggcatgtccggtgcgggc
aaatccaccgcgctcaacacgttcgaggatatgggctgggaggttgtcgacaacctgccc
ttgtcgctgctcaatcgcctgctcggcaccccattgcccgaaggtgcggacgatggcagc
cgcccgctggcctttggcatcgacagccggacgcgcggcttcgatgcgggcgcgatcgtc
cgcaccattcgccagctgcgcgatgaacggggcgacgatatcgaagtgctgttcctcgat
tgcagcggcgccgaattgcagcgccgctattcggaaacgcgccgccgccatccgctggcc
ctcgatcgccctgcggccgacggcatcgcccgcgaacgcgaactgatggccgatctgcgc
cagtccgccgatctggtggtggataccaccgaaaccaccaccaacgccctgcagcgcgaa
ttgcgccagcatttcggcggcgccgaaacggatcagccgacattgacggtgatgtcgttc
ggcttttcgcgtggcgtgccgcgcaacgccgatctggtgttcgacatgcggttcctgcgc
aatccccactgggatgaggtgctgcgcccgctgaccgggctggatgcggccgtaggcgat
tatatcgccgaagaccccgcatatgaggccgcggtttcgcggattgaagaactgctgctg
ctgctgctgccgcgttacgccgccgagggaaaatcctatgtcacggtggcgttcggctgc
accggcgggcggcatcgttcggtccacgttaccgagcgggtagcggcacggttgcgcggc
gcggcattttctccgaatgtgagccatcgtgacctcgcctcggcgccgcacgactcgttg
gagaggatgccaaataatggcgcgaaacagatttcttcgggtggttga
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