Sphingomonas sp. KC8: KC8_05150
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Entry
KC8_05150 CDS
T04987
Name
(GenBank) FecI sigma-24 factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spkc03021
]
KC8_05150
Transcription machinery [BR:
spkc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KC8_05150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
Xre-like-HTH
GerE
HTH_28
HTH_23
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ARS26676
UniProt:
A0A1X9YD11
LinkDB
All DBs
Position
1066384..1066956
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AA seq
190 aa
AA seq
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MTVDFNRLDDGELATLAIAGHDAAFAEILHRHRDPVYRLVRGHIGNADEALDVTQDVFVA
ALQHLGRYDPARPLRAWLARIAINRCRDWRRRQRVRRFFTFASAIPRDAIETVPDPAAAI
DIAVADRQALTHLTQAIAALPTALKEVLLLRTVEGLSQAETAAALGISEKAVETRLYRAR
GRLREMIGNR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgatttcaatcgcctcgacgatggcgaactcgcaacccttgctatcgcgggc
catgacgccgccttcgcggaaatcctgcaccgccatcgcgatccggtctaccggctggtg
cgtggccatatcggcaatgcggacgaagcgctcgatgtcacgcaggatgtgttcgtcgcg
gcactccagcatctcggccgctacgatccggcacgcccgctgcgcgcatggcttgcccgc
atcgcgatcaacaggtgccgcgattggcgccgccgtcaacgcgtccgccgatttttcaca
tttgcatccgccataccccgcgacgctatcgaaacggtgcccgatccggcagccgccatc
gatattgcggtcgccgatcgccaggccctcacccatctgacgcaagcgatcgccgccttg
cccaccgcgctgaaggaagttctgctgctgcgcacggtcgaaggcctgtcacaggccgaa
accgccgcagcgctggggatcagcgaaaaggccgtcgaaacacggctctaccgcgcacgc
ggccgtttgcgggaaatgatcggcaaccgctga
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