Sphingomonas sp. KC8: KC8_05160
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Entry
KC8_05160 CDS
T04987
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_05160
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_05160
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARS26677
LinkDB
All DBs
Position
complement(1067455..1070250)
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AA seq
931 aa
AA seq
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MSDLSRRAFRAFLAVGCCLPALATPAAAQDGASDTAGDIIVTGSRIPRVSEEGPAPVTVI
NADTIRANGYTSVPDILRAVTQNGGETQSQQSFSGSSFTPGAQQVDLRGLGPNHTLVLVN
GRRIADFPLPFQGRSNFTDISNIPVGLIEQVEVLSGSASAIYGSDAIAGVINFKLKEKVD
GTTIDYRYGRTEHGGGTSHRATLTTGWSNDRFHIVGGVEYLLQRPIWASSRKIQDSRADD
PTTETTVAGRTFLRYNPDLDEYVDPGAATCASLAYLNGGSTYYASRPRYGAYDPVLDDYG
PGRFCGSDRSVGYGTIISRREGFNSYMSAGYELSDAAELFVDAQFGISKVSLLRDVMKWG
FQNSSGSSDATFYNSFDGVLDDWYRQFTPEESGGFKNVMTRNRQQTFSITPGVKGGFADK
WSYELSFNHSEYKSRVKFPQVIAAKANELFLGQQQGVDPDSGYPIFNADPARLYQPLTRA
EYDSIAVYSVYKPRSWTDNLSATLTTTDLFQLPAGPVGFAAVGEFGKQGYDLNPDPLALT
DYYYGLKDSDGQGKRTHWALGGELRVPVTSFLQMSGAARYDHFRFAGNGVGKFTYNGGLE
LRPTRTLLMRAAYGTGFRAPDLHYVFTGPGNTHPSATDYFLCRSEEPDEDIGDCTYSDEG
IVAQRDGNRRLKPETSKSLNAGIVWAPARYFDISVDYFRVALSNQVLDLSIDQLLRDEAD
CRIGSTSAGSPVDITSPTCQDALTRVHRFASGVNQGELDSVSINPINVAHEKTSGIDIAI
HGWVPTSFGEFALSLSHTHVFDHKIRQYVGDPTVNKLAADSGYYIPRDKTSGSITWSLEK
LKWTVEGKRLGKLPNYDEDAYIRASYLFSTTLQYDFTDHLRGSLTVTNLFDANPVKDRTY
ASYPYYDISWFDSVGRSMFMQLTYKLGGNGL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttgtcacgtcgggcgtttcgggctttcctggcggtaggctgctgcctgccg
gcgctggccacgccggctgcggcgcaagacggcgccagcgatacggccggcgatatcatt
gtcaccggttcgcgcattccccgtgtttcggaggaagggccggctcctgtgacggtaatc
aacgccgatacaatccgggcgaatggttatacgagcgtgccggatattctgcgtgcggtt
acccagaatggtggtgaaacgcagagccagcagtcgttcagcgggtcgagcttcacgccc
ggtgcccagcaggtcgatctgcgcggacttggccccaatcatacgctggtactggtcaat
ggtcgccgcattgccgatttcccgcttccttttcaggggcgtagcaacttcaccgatatt
tccaacattcccgtcggtttgatcgaacaggtggaagtgctgagcggcagcgcgtcggcg
atctatggttcggacgccatcgccggcgtgatcaacttcaagctaaaggaaaaggtcgac
ggcacgaccattgattatcgctacgggcggacggaacatggcggtggcacttcgcaccgc
gcgacgttgacgaccggctggtcgaacgatcgtttccacatcgtcggcggtgtcgaatat
cttctccagcgcccgatctgggcgtcgagccgcaagattcaggacagtcgcgccgacgac
ccgacgacggaaacgacggtggcggggcggactttcctgcgatataatccggatctggat
gaatatgtcgatccgggcgccgcgacctgtgcgtcgctggcctatctgaatggcggttcg
acctattatgcgtcacggccgcgctatggcgcgtatgatcctgtgctcgacgattatggc
cccggccgtttctgcggcagcgacagatcggtgggctacgggacgatcatttcccggcgt
gaaggcttcaacagttacatgtccgccgggtatgaattgtccgatgcggccgaattgttc
gtcgatgcgcagttcggtatcagcaaggtttcattgctgcgcgacgtcatgaaatggggc
ttccagaattcttctggcagcagcgacgcgaccttctacaacagtttcgacggcgttctg
gacgattggtatcgccagttcacgccagaagaatccggcggcttcaagaatgtcatgacc
cgcaaccgccagcagactttcagcatcacgccgggggtgaagggcggttttgcggataaa
tggtcctacgaactgtcgttcaaccatagcgaatataaatcgcgggtgaaattcccccag
gtcatcgcggccaaggccaatgaactgttcctggggcagcagcagggtgtggatcccgac
agcggctatccgattttcaatgccgatccggcacgcctttatcagcccctgacgcgggcg
gaatatgacagcatcgccgtctacagcgtctacaagccgcgcagttggaccgacaatctt
tcagcgacgctgaccaccaccgatttgttccagttgccggccggccccgtcggctttgcg
gcggttggcgagtttggcaagcagggttatgatctgaaccctgatcccttggcgcttacc
gattattattacgggctgaaggatagtgacgggcagggcaagcgtacccattgggcgttg
ggcggcgaattgcgcgttccggtaaccagttttctccagatgtccggcgccgcacgatac
gatcatttccggtttgcgggcaatggcgtaggcaagttcacatataatggtggtctggaa
ttgcggccgacccggacattgttgatgcgggcggcttatggcaccggcttccgtgcgcct
gatctgcattatgtgttcacggggccgggtaatacacatccatcggccacggattacttt
ctgtgccgatcggaagagccggatgaggatatcggcgattgcacctattccgacgaagga
atcgttgcgcaacgcgacggcaatcgacggttgaagccggaaaccagcaagtcgctgaac
gccggaatcgtctgggcaccagcgcggtatttcgacatatcggtggattatttccgcgtc
gcgctgtccaatcaggtgctggatctgagcatcgaccagttgctgcgcgacgaagccgat
tgccgcattggttccacttcggcgggcagcccggtcgatattacgtcgccgacctgccag
gacgcgctgacccgcgttcatcgttttgcgtccggtgtgaatcaaggtgaactggactcg
gtctccatcaatccgatcaatgtcgcgcatgaaaagaccagcggcatcgacattgccata
catggctgggtacccaccagcttcggcgaatttgcgttatcgctgtcacacacccatgtg
ttcgaccacaagattcgccaatatgtcggtgatcccacggttaacaagctggcggccgac
agcggttattatatcccgcgcgacaagacgtccggcagcattacctggtcgctcgaaaag
ctgaaatggacggtggaaggcaagcgactgggcaagctgcccaattatgacgaggatgcc
tatatccgcgccagctacctgttcagcaccaccttgcaatatgatttcaccgatcatctg
cgcggttcgctgacggtgaccaacctgttcgacgccaacccggtgaaggatcggacatac
gccagctatccttattatgacatcagctggttcgatagtgtcggccgcagcatgttcatg
cagttgacgtacaagctgggcggcaacggcctgtaa
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