Sphingomonas sp. KC8: KC8_05580
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Entry
KC8_05580 CDS
T04987
Name
(GenBank) lytic transglycosylase subunit
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spkc01011
]
KC8_05580
Enzymes [BR:
spkc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KC8_05580
Peptidoglycan biosynthesis and degradation proteins [BR:
spkc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KC8_05580
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
ARS26758
UniProt:
A0A1X9YD34
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All DBs
Position
complement(1167322..1169094)
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AA seq
590 aa
AA seq
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MTPVRLILSALALGVAAPALAAVEAMPSPVIALKPPVGMGKVPDQLDMQQRANYRAVFAA
IRAGAWDDAAARLDAMPGGLLTPYARAELAIAKGSPKMDSDVLIALIEANRELPQAAQIA
RLLQGRGVTALPALPVEQGMSRLPGASRRATARSLRSDAVAAALNARIAPLVKDDRPAEA
EILLQDKAAELSPDALTELQQRVAWSYFLVGDDAAARRVAASARVGQGDWAVQADWVAGL
AAWRQQDCAAAANAFSAVAARSRDTEMTAAGLFWAARAEMACGTPEKVQARLRTAARMTE
TFYGLLADAALGRVPPAREMGPAFIQADWTTISKRSNARIAAALAEIGESGMADTVLRHQ
ARIGDCLDHEALMHLAAKLGLPGTQIWLSQNGPAGAQISASSRYPAPEWTPQGGWRVDKS
LIFAHALQESQFRADAVSPAGARGLMQVMPGTAQLIARRKGEAVGSLSDPRTNIEYGQFY
LEELRDASGTGGLLPKVIAAYNAGPGSVVKWNERRRDNGDPLLFIESIPFRETRGYVAIV
LRNYWMYQRQAGEQSASLKAMAQGMWPRFPGMPGRTAIRLDPVSGVASAD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggttcgtttgatattgagcgcgctggcgcttggcgtggcggcgcctgcactg
gctgccgtcgaagcgatgccgtcaccggtgatcgcgctcaagccgccggtgggcatgggc
aaggtgcccgatcagctcgatatgcagcagcgggccaattatcgggcggttttcgccgcg
atccgcgcgggcgcgtgggacgatgcggcggcacggctggatgcgatgcccggcggattg
ctgacgccctatgcgcgtgcggaactggccattgccaagggttcgcccaagatggacagc
gatgtcctgatcgccctgatcgaggccaatcgcgaattgccgcaggccgcgcagattgcg
cggctgttgcaggggcgcggcgtgaccgcgctgcccgcgctgccggtggaacaggggatg
agccgcctgccgggcgcatcgcgccgcgcgacggcccgttcgctgcgcagcgatgcggtg
gcggcggcgctgaacgcgcgcattgcgccactggtgaaggatgatcgcccggcggaagcg
gaaattctgctgcaggataaagcagccgaactttcccccgacgcgctgacggaattgcag
cagcgggttgcctggtcctattttcttgtcggcgacgacgctgccgcgcggcgcgtggcc
gcatccgcgcgggttgggcagggcgactgggccgtgcaggccgattgggtggccgggctt
gcggcgtggcgccagcaggattgtgccgcggcggcgaatgccttttctgcagtggccgcg
cgttcgcgcgatacggaaatgacggcggcggggttgttctgggccgcgcgcgccgaaatg
gcatgcgggacgcccgaaaaggtgcaggcacgattacgcaccgcagcgcggatgacggaa
acattttacgggctgctggccgatgcggcgctgggccgcgtgccgccggcgcgtgagatg
gggccggccttcattcaggcggactggacgaccatttccaagcgcagcaacgcccgcatc
gccgcagccctcgccgaaatcggcgaaagcggcatggcggatacggtgttgcgccatcag
gcgcggatcggcgattgcctggaccatgaagcgctgatgcacttggcggccaagctcggt
ctgccgggcacgcagatatggctgtcgcaaaatggcccggcaggggcgcagatttcggcg
tcgagccgttaccccgcccctgaatggacgccgcagggcggctggcgcgtcgataaatcg
ctgatcttcgcgcacgccttgcaggaatcgcagtttcgcgccgacgcggtaagcccggcc
ggcgcgcgcgggctgatgcaggtgatgccgggtacggcgcagctgatcgcacggcgcaag
ggcgaagcggtgggcagtctttccgatccgcgcaccaacatcgaatatggccagttctac
ctcgaagaattgcgcgacgcatcgggcacgggcgggctgctgcccaaggtgatcgcggcc
tataatgccggccccggatcggtggtgaagtggaacgaacgtcgccgcgacaatggcgat
cctttgctgttcatcgaatcgatcccgttccgcgagacgcgcggctatgtcgcgatcgtg
ctgcgcaattactggatgtaccagcggcaggcgggcgagcaatcggccagcctgaaggcg
atggcgcagggcatgtggccgcgttttccgggaatgcccgggcgcaccgcgatccggctc
gatcccgtcagcggggtggcgagtgccgattga
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