Sphingomonas sp. KC8: KC8_07450
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Entry
KC8_07450 CDS
T04987
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KC8_07450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_07450
Enzymes [BR:
spkc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KC8_07450
DNA repair and recombination proteins [BR:
spkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KC8_07450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARS27125
UniProt:
A0A1X9YE84
LinkDB
All DBs
Position
complement(1565770..1566414)
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AA seq
214 aa
AA seq
DB search
MTMPSPIEPPRDCPRCPRLVAFRAEQRAAHPDWHNAPVSSFGDSDAWLAIVGLAPGLWGA
NRTGRPFTGDFAGALLYETLGKFGLADGTFAGRPDDGLVLNGAIVVNAVRCVPPENKPLP
EEIKACRDFLKPDLARLPNLKVVIALGQVAHQSVVKALGGKLPKCRFAHGAEHRVPSGMM
IVDSYHCSRRNQNTGLLTAEMFEAVFARAMELKG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcccagcccgattgaaccgccgcgcgattgcccgcgctgtccccgccttgtg
gccttccgtgcggaacagcgcgccgcccatcccgactggcacaatgcgccggtatccagc
ttcggcgacagtgatgcgtggctggccattgtcggcctggcccccggcctgtggggcgcg
aaccgcaccggccgcccgttcaccggcgatttcgcgggcgcgctactgtacgagacgctt
ggcaaatttgggctggcggacggcacctttgccggtcggccggatgatgggctggtgctg
aacggcgcgatcgtcgtcaatgcggtccgctgcgtgccacccgaaaacaagccgctgccg
gaagagatcaaggcctgtcgggatttcctgaagcccgatctggcgcgattgcccaatctg
aaggttgtcatcgccctcggccaggtcgcgcatcagtcggtggtgaaggcgctgggcggc
aagctgcccaaatgccgcttcgcccatggtgccgagcatcgcgtgccaagcggcatgatg
atcgtcgacagctatcattgttcgcggcgcaaccagaataccggtttgttgacggctgag
atgttcgaagccgtgttcgcgcgggcgatggaattgaagggctga
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