Sphingomonas sp. KC8: KC8_08855
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Entry
KC8_08855 CDS
T04987
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KC8_08855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_08855
DNA repair and recombination proteins [BR:
spkc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KC8_08855
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KC8_08855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
SpdB
Motif
Other DBs
NCBI-ProteinID:
ARS27402
LinkDB
All DBs
Position
complement(1863049..1863780)
Genome browser
AA seq
243 aa
AA seq
DB search
MHIAATAIVCSVLIHGEHGVVARLLTPDDGLQPGYVRGGRSRRLRPVLLPGNIVQADYRS
RSDAQLAALTVELVESRAGLMGEPLAAAAVDWATALTAITLPEGQPFPELYVALDGLLSA
IDAAPSARGWAAALARYELMMLAHMGFGLDLSACAVTDASDDLTYVSPKSGRAVSAAAGE
GYRDRLLPLPGFLIGGGVAGDWADILAAFRLTGHFLARDVLTDRRAGVLAARGRLIDRIK
RLS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcgccgccaccgcaatcgtctgttccgtcctcatccacggcgaacatggcgtg
gtggcacggctgctgaccccggacgacgggttgcagcccggctatgtacgcggcgggcga
tcgcggcgactgcgcccggtgctgctgccgggcaatatcgtccaggccgattatcgttcg
cgcagcgatgcgcaactggcggcgctgacggtggaactggttgagagccgtgcggggctg
atgggggaaccgcttgcggccgcagcggtcgactgggcgaccgcgttgaccgcgatcacc
ttgcccgaaggtcagccctttcccgaattgtacgtggcgctggatggtttgctcagcgcg
attgacgcggcgccgtcggcgcgcggctgggcggcggcgctggcccgctacgaactgatg
atgctggcgcacatgggatttggtctcgatctgtcagcctgcgctgtcaccgacgcgagt
gacgatctcacctatgtcagcccgaagagcggccgggcggtcagcgcagcggcgggggag
gggtatcgcgatcgcctgctgcctttgcccggctttttgatcgggggcggggtggccggg
gactgggccgatatcctcgctgcgttccgccttaccggccatttccttgcgcgcgacgtg
ctgaccgatcggcgtgctggcgtgctggcggcgcgcgggcggctgatcgatcggatcaaa
cgacttagttga
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integrated database retrieval system
