Sphingomonas sp. KC8: KC8_10910
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Entry
KC8_10910 CDS
T04987
Name
(GenBank) TonB-dependent receptor for transport vitamin B12
KO
K16092
vitamin B12 transporter
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_10910
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_10910
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARS27799
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All DBs
Position
2282620..2284593
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AA seq
657 aa
AA seq
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MQFRNISQVALATVFVCSGHIARAENVADIVVTGAGLEETLPQELAHYGSAIEVVTEKLV
KDGAFVDVAAALELVPGLYIKPASGPFSYVDLSLQGSRTQDILWAVDGIRINNRLYGGTS
PNDTLPASMIERIEVLKGGESLFYGTQAAAGVINIVTRSFSDDFNGQINGSVDNRAGTNL
DGYLRGSIGRHRFVAYASRNRSEGYQPFSAMEPSATDRKRGYELWSVGGKYQYDLGADFA
FNLQYQHTEARLDNLSAIRTRESRNDRNEEIASVRLDYVGNDTVQFFLKGYFHDWKTAYI
QIRNDPATGAPVVIYPEGTFWGYRDFGGSALVKLKPHRGLEYLVGYDYQNFSGRDDVLLI
GKSKERVHAGTFQVRTTDDLSRRGRFAAGLRYNKTGGAQTTVWNVSGRSDVTASLYVEAI
GGTSFILPDASQLYQIDPCCERGNPNLKPEESLNLNVATGGTLATGALTWRATYFRRRID
NLIDVSFNDPAFPDGIYVNVDRRVKVEGGEFQLSAVLAEAWHLSGSYTVTRARNQGSDRQ
RDRTPKQFASGSIAYAPADRPFGTNLSVNWVGDTWSSPAGFARQNYGNYAVVGAGFHLYP
DGSARRHRLGINIENMFDNDYATRGYGSAQRDDGSGRFLYFTRGVPRTLRVSYGLSI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaggaatatttcgcaggtggcgctggccactgttttcgtatgttcaggccac
atcgcccgggcggagaacgtagccgacatcgtggtcacgggcgcggggctggaagaaacg
ctcccgcaagagttggcccattacggcagtgcgatcgaggttgtgaccgaaaaactggtc
aaggacggcgccttcgtcgatgtcgccgccgctttggaactggtgccggggctttacatc
aagccggcaagtggcccgttcagctatgtcgacctgtcgttgcagggatcgcgcacccag
gatattttgtgggcggtcgacggtatccgcatcaacaaccgcctttacggcggaacttca
cccaacgacacgctgcccgccagcatgatcgaacggatcgaggtgctgaagggtggcgag
agcctgttctacggcacccaggcggcggccggcgtcatcaacatcgtcacacgatcgttc
agcgatgacttcaacggccagatcaacggcagcgtcgataatcgcgcaggaaccaatctt
gacggctacctccgcggcagcatcggccggcaccggttcgtcgcctatgcgtcgcgcaac
cgatcggagggctaccagccgttcagcgcgatggaaccgagcgcgacggaccgcaagcgc
ggctatgaactctggtccgtcggcggcaaatatcagtatgatctgggcgcggacttcgcg
ttcaatctgcaatatcagcacacagaggccagactcgacaatctgagcgcaatccgtacc
cgcgaaagccgcaatgaccgcaacgaggaaatagcaagcgtccggctcgattatgtcggc
aacgacacggtccagttcttcctcaaaggctatttccacgactggaagacagcctacatc
cagatccgcaatgatccggccaccggcgcaccggtcgtcatctacccggagggtacattc
tgggggtaccgcgattttggcggcagcgcgctggtcaaactgaagccccatcgcgggttg
gaatatctggtcggctatgattaccagaatttcagcggccgcgacgacgttctgctgatc
ggcaagagcaaggaacgggttcacgcaggcaccttccaggttcgcacgaccgatgatctg
tcccgccgcgggcggtttgcagcgggcttgcgctacaacaagacgggtggtgcgcagacg
acggtctggaacgtctccggccggtccgatgtcaccgccagtttgtatgtcgaggccatc
ggcggcacatccttcatcctgcccgacgcctcgcaactctatcagatcgatccctgctgc
gaacgcggcaacccgaacctgaagccggaggaaagcctcaatctcaacgtcgcaaccggc
ggcactctcgccacgggcgcgctgacctggcgggcaacctatttcaggcgtcgcatcgat
aatctcatcgatgtttcattcaacgacccggcatttcccgacggcatctacgtcaatgtc
gatagacgcgtgaaagtcgagggtggcgaatttcaactcagcgcggtgctggcagaggcc
tggcatctcagcggcagctatactgtcacccgggcacgcaaccagggatcggatcgccag
cgtgatcggacgccgaagcaattcgccagcggctcgatcgcctatgcacccgcggatcgc
ccgttcggcactaatctttcggtcaattgggtcggggatacatggtcctcgccggccggc
ttcgcgcggcagaattacggcaattatgcggtcgttggcgccggtttccatctgtatcca
gatggcagcgcccggcgacatcgtctcggcatcaacatcgagaacatgttcgacaatgac
tatgcgacgcggggttacggctccgcgcagcgcgatgatggcagcggccgtttcctatac
ttcacccgtggcgtgccgcggacgctccgggtcagttatggtctgagcatttag
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