Sphingomonas sp. KC8: KC8_11025
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Entry
KC8_11025 CDS
T04987
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KC8_11025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spkc02044
]
KC8_11025
02035 Bacterial motility proteins [BR:
spkc02035
]
KC8_11025
Secretion system [BR:
spkc02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
KC8_11025
Bacterial motility proteins [BR:
spkc02035
]
Pilus system
Pilus assembly proteins
KC8_11025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
eRF1_1
Motif
Other DBs
NCBI-ProteinID:
ARS27821
LinkDB
All DBs
Position
2308242..2309762
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AA seq
506 aa
AA seq
DB search
MRITKNSQYALGLALAACLAAGITTAEWAPAMAAPAATAPSDRVTLSVGTGQMVKLNSAM
TDLFVANDAIADVQVRSPTQLYIFGKGAGETTVYATNKSGQVVYSSNVRVGANYSNVGQM
LKIAMPEAQITATPMNGMVLLTGTVAAPGDVEEAQQLVQAFVGKETQVISRLKTATPMQV
NLQVKIAEVSRELIKEVGVNLMSQDTTGGFLFGIAQGRNIGTITTLPNGATVFDLKNLGQ
GAGRTNLGLAGKLFGLDIAAALDLAENDGLVTTLANPNLTALSGETASFLAGGEVPIPIS
QALGTVSVEYKQYGVSLAFTPTVLADGRISLRVRPEVSQLSSAGSVTLQGFNIPGFSTRR
AETTVELGSGQAFMIGGLLSNNQNNAVDKAPFLGDLPILGSLFRSNKFQRRESELVIIVT
PYLVKPMTASQARLPTDGYKSPTDFERVIGGQSFSGKSGAVRPGPTAAPPVTVAPGIAGS
PAADATSATRSTPAKGPAPAPGFSFN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccaagaatagccaatatgcgctggggctggcgcttgccgcctgccttgcc
gccggcatcacgactgccgagtgggcaccggccatggcggcgcccgccgccaccgcgcca
tcggatcgcgtgacgctttccgtcggcaccggccagatggtgaagctcaacagcgcgatg
accgacctgttcgtcgccaatgacgccatcgccgacgtgcaggtgcgttcgcccacccag
ctttatattttcggcaagggcgcgggcgaaaccacggtctacgccaccaacaagtccggg
caggtggtctattcctccaatgtccgtgtcggcgcgaattacagcaatgtcggccagatg
ctgaagatcgcgatgcccgaagcgcagatcaccgcgacgccgatgaacggcatggtgctg
ctgaccggcaccgtcgccgcccccggcgacgtcgaggaagcccagcagcttgtgcaggcc
ttcgtcggcaaggaaacgcaggtgatcagccggctgaagaccgcgacgccgatgcaggtg
aacctgcaggtgaagatcgccgaagtgagccgcgaactgatcaaggaagtcggcgtcaac
ctgatgtcgcaggacaccaccggcggcttcctgttcggcatcgcacagggccgcaacatc
ggcacgatcaccaccctgcccaacggcgccaccgtgttcgacctcaagaatctgggtcag
ggcgcgggacgcaccaacctcgggctggcgggcaagctgttcggcctcgacatcgccgca
gcactcgacctggccgaaaatgatgggctggtgacgacgctggccaaccccaacctgacc
gcgctttcgggcgaaaccgccagcttcctggcgggcggcgaagtaccgatcccgatcagc
caggcgctgggcacggtttccgtcgaatataagcagtatggcgtcagcctggcgttcacc
ccgacggtgctggccgatggccgcatttcgttgcgcgtgcggccggaagtgtcccagctt
tcatcggccgggtcggtgacgctgcagggcttcaacatccccggattcagcacgcgccgc
gccgaaacgacggtggaactgggttcgggtcaggccttcatgatcggcggcctgctctcg
aacaaccagaataacgcggtcgacaaggccccgttcctgggcgacctgccgatcctgggt
tcgctgttccgatcgaacaagttccagcgccgcgaaagcgaactggtgatcatcgtcacc
ccttatctggtgaagccgatgacggcgagccaggcccgcctgccaaccgacggctataaa
tcccccaccgatttcgaacgggtgatcggcgggcagagcttcagcggcaaaagcggcgcc
gtccgccccggaccgaccgctgcaccgcccgtgaccgttgcccccggcatcgccggcagc
ccggccgccgacgccacgtcggcgacgcgcagcacacccgcaaaaggcccggcgcccgcg
cccggcttctcgttcaactga
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