Sphingomonas sp. KC8: KC8_11220
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Entry
KC8_11220 CDS
T04987
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_11220
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_11220
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARS27858
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All DBs
Position
complement(2346905..2348851)
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AA seq
648 aa
AA seq
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MFKPFILSSLLLSSAAYAEQVAPTPDAAAAPEAAEAGVILVTATRVPTAIDRVVSSVSVL
DKAAIDRAQDIGVTELLQRLAGVSFSRNGGYGTVTSIRIRGAETDQTVVVIDGVKLNDPS
STGGGFNFANLLVGDASRIEVLRGPQSILWGSQAIGGVVNIVTAAPQKDLEASFDIEAGS
RDTVNARAAVGGRTGPLSWRIGGNAFTTDGISAIRKDAGGGEADGYTNRSVSGRAELAIT
DGITADMRGYYSRGRVEIDGFAGDTAEYGLNREFVGYAGLNVDLFGGRLRNRFAYGYTDT
NRDNYDPTRARPQTFDAAGQNKRLEYQGTFAITDKWTALFGVENERSKFRTVSPSGSLAV
PVPAPVRGRARITSVYGQLSGELLSGLTVTGGVRHDDHANYGGKTQFAGGAVWALPTGTV
LRASYADGFKAPSLYQLFSEYGNTGLSPERAHGWEAGIEQRLFGDVLTVGATWFQRKTKD
QIDFNSCDFPTSTDPLCVTPGSGDPRFGYYINVARTEAKGLEATASLRLAENLLVDGNYS
WIKAENSDTGKWLTRRPRSTANGSISYAWPFGLTTGAAVRWSGKSYDNVTNSRRLDAYTL
VDLRAELAVRDGLSLFARAENLFDEDYQTVYRYGTLGRSIYAGVRARF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaccattcattctttccagcctgctgctgtcctccgctgcctatgcggaacag
gtcgcacccacgcccgacgcggcggctgcacccgaggccgccgaagccggcgtcatcctc
gtcaccgcaacccgcgtgccgaccgcgattgaccgcgtcgtttcgtccgtgtcggtgctc
gacaaggcggcgatcgatcgcgcgcaggatatcggtgtcaccgaactgctccagcggctg
gccggcgtcagtttctcgcgcaacggcggctatggcacggtgacatcgatccgcatccgt
ggcgccgaaaccgatcagacggtggtggtgatcgacggggtcaagctcaatgatccgtcg
tccactggtggcggcttcaactttgccaacctgctggtcggtgatgcgtcgcggatcgaa
gtactgcgcgggccgcagtcgatcctgtggggtagccaggcgatcggtggcgtcgtcaat
atcgtgacggctgccccgcaaaaggatctggaagccagcttcgatatcgaggccggatcg
cgcgatacggtgaatgcacgcgctgccgttggcggccgcaccgggccgctgtcgtggcgg
atcggtggcaatgcgttcactaccgacggcatttcggcgatccgtaaggatgccggcggc
ggcgaggccgatggctacaccaaccgcagcgtcagcggccgcgccgaactggcaatcacc
gatggcatcaccgccgatatgcgcggctattattcgcgcggccgggtcgagattgacggc
tttgccggcgatacggccgaatatggcctcaaccgcgaatttgtcggttatgccgggttg
aacgtcgatctgttcggcggccggctgcgcaaccgttttgcctatggttacaccgatacc
aatcgcgacaattatgatccgacgcgggcgcgcccgcagacgttcgacgcggcgggccag
aacaagcggctcgaatatcagggcacctttgcgatcaccgacaagtggaccgcattgttc
ggcgttgaaaatgagcggtcgaagttccgcaccgtttcgccgtccggttcgcttgccgtg
ccggttccagcgccggtgcgcgggcgtgcgcggatcaccagcgtctatggccagttgagc
ggcgaactgctgtccgggctgacggtaacgggcggcgtgcgccatgacgaccatgccaat
tatggcggcaagacccagtttgctggcggtgcggtgtgggcgctgcccaccggcacggtg
ctgcgggcgagctatgccgacggcttcaaggcgccgtcgctgtaccagctgttctccgaa
tatgggaataccggcctgtcgcccgaacgcgcgcatggctgggaagcgggcatcgaacag
cgcctgttcggcgatgtgctgacggtcggggcgacctggttccagcgcaagaccaaggac
cagattgatttcaacagctgcgatttcccgacgtcgaccgatccgctgtgcgtgacgccc
ggcagcggcgatccgcgtttcggctattacatcaatgtcgcgcgcaccgaagccaagggg
ctggaggcgacggcatcgctgcgtctggctgaaaaccttctggtcgacggcaattatagc
tggatcaaggccgaaaacagcgacaccggcaaatggctgacccgccgcccgcgcagcacc
gccaacggatcgatcagctatgcctggccgtttgggctgacaaccggggctgcggtgcgc
tggtcgggcaagagctatgataatgtgaccaacagccgtcgccttgacgcatacacgctg
gtcgatctgcgggccgaactggcggtgcgcgatggcctcagcctgtttgcccgcgccgaa
aacctgttcgatgaggattatcagacggtctatcgctacggcacgctcggccgcagcatc
tatgccggtgtgcgggcgcgcttctga
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