Sphingomonas sp. KC8: KC8_11275
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Entry
KC8_11275 CDS
T04987
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc00730
Thiamine metabolism
spkc01100
Metabolic pathways
spkc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KC8_11275
Enzymes [BR:
spkc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
KC8_11275
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ARS27866
UniProt:
A0A1X9YGB5
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Position
complement(2354733..2356592)
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AA seq
619 aa
AA seq
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MADIPARTEMKVTTGPIRGSRKVHVGPLKVAMREIDLEPSSGEAPLRVYDCSGPYTDPNA
RIDIMAGLPELRRDWIRSRGDVEEYDARAVKPEDNGLSGPDRSGGVQPFPNVRQRPLRAK
PGLNVSQMHYARRGIITPEMEYVAIRENLGREQIRNHIRDGQDFGAAIPDYVTPEFVRDE
VARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASDVANEVDKMVWSIRWGADT
VMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLIEQAEQG
VDYFTIHAGVRLPYIPMTAKRVTGIVSRGGSIMAKWCLAHHKESFLYERFEDICEIMKAY
DVAFSLGDGLRPGSIADANDEAQFSELATLGELTQIAWKHDIQVMIEGPGHVPMHKIKAN
MDKQLEACGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSRARFEFRWRDQFNLSLDPDTAEQYH
DQTLPAEGAKTAHFCSMCGPKFCSMKITQEVRDFAAKQNASADTFIVAAGNEAEAEAGMA
EMSEKFKEQGGEIYLPAAG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccgatattcccgcgcgcactgaaatgaaggttacgaccgggccgatccgcggcagc
cgcaaggttcatgtcggcccgctgaaggtggcgatgcgcgagatcgaccttgaaccgtcg
tcgggcgaagcgcccctgcgcgtttacgattgttccggcccttacaccgatccgaatgcg
cgcatcgatatcatggccggcctgcccgaactgcgccgcgactggattcgcagccgtggc
gatgtcgaggaatatgatgcccgtgcggtgaagcccgaagataacggcctgtccggccct
gaccggtcgggtggcgtccagcctttccccaatgtccgccagcggccattgcgcgcgaag
ccggggctgaatgtcagccagatgcattatgcgcggcgcggcatcatcacgcccgaaatg
gaatatgtcgcgatccgtgaaaatctggggcgcgaacagatccgcaaccatatccgcgac
gggcaggatttcggggcggcgatccccgattatgtgacgcccgaattcgtgcgcgacgaa
gtggcgcgcggccgcgcgatcatccccaacaacatcaaccaccccgaaagcgaaccgatg
gcgatcgggcgcaatttcctggtgaagatcaacgccaatatcggcaattcagcggtcgcg
tccgacgttgccaacgaagtcgacaagatggtctggtcgatccgctggggcgcggatacg
gtgatggacctgtcaaccgggcgcaacatccacgacacccgcgaatggatcctgcgtaac
tcgccagtgccgatcggcacggtgccgatctatcaggcgctggaaaaggttggcggcatt
gccgaggatctgacgtgggaaatcttccgcgacacgctgatcgaacaggccgaacagggc
gttgattatttcacgatccatgccggcgtccgcctgccgtacatcccgatgacggccaag
cgcgtgaccggcatcgtcagccggggcggttcgatcatggcgaaatggtgcctggcgcac
cataaagagagcttcctctacgaacggttcgaggacatttgcgagatcatgaaggcctat
gacgtggccttttcgctcggcgatgggctgcgccccggttcgatcgccgacgccaatgac
gaagcgcagttcagcgaactggcgaccttgggcgaactcacccagatcgcctggaagcat
gatattcaggtgatgatcgaaggccccggccatgtgccgatgcacaagatcaaggcgaat
atggacaagcagctggaggcgtgcggcgaagccccgttctacacgctcgggccgctgacc
accgatatcgcgccgggctatgatcatatcacctcggcgatcggggcggcgatgatcggc
tggttcggcaccgcgatgctttgctatgtcacacccaaggaacatctggggctacccgat
cgcgatgacgtgaaggtcggtgtcgtcacctacaagctggctgcccatgccgccgatctg
gccaaggggcatccggcggccaaggtgcgcgacgatgcgttgagccgcgcacggttcgag
ttccgctggcgcgaccagttcaacctgtcgctcgatcccgatacggccgaacaatatcac
gatcagacgctgcccgccgaaggcgccaagaccgcgcatttctgttcgatgtgcggcccc
aaattctgttcgatgaagatcacgcaggaagtgcgcgattttgccgccaagcagaatgcc
agcgccgataccttcatcgtcgctgcgggcaatgaagccgaggccgaagcgggcatggcc
gaaatgagcgagaaatttaaggaacaaggcggggaaatttacctgccggcggccgggtaa
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