Sphingomonas sp. KC8: KC8_12275
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Entry
KC8_12275 CDS
T04987
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_12275
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_12275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Flg_new_2
Porin_4
Motif
Other DBs
NCBI-ProteinID:
ARS28059
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Position
2574816..2577092
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AA seq
758 aa
AA seq
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MRNLRSILLGCVACTAFHPLAAIAQDTQAGASERGLGDIVVTARRVEENLQSVPVAVTGF
NSEMLQNLNIANFGDLGAAVPNLDVQRQFGSASAPQFYLRGVSTGSLKFETDAGIGLYID
GVYLGRPAGTAFDLADIERVEVLRGPQGTLFGRNSTGGAINFITAAPSGELKVKVEGTIG
NFDRYKGRISVDLPAFGPLSVRLSYLHDQNRGYVKNLTPGRTYNFTAPFGTVKSAKDFGR
ENTDAFAAAARLDLDALKIDYKFDYTDKRSTQLGQQLLGFDPSFAATAPAFYGSPSLVVG
PSTKRQKALALDFTTPSRLKIQGHSLTAAYDISDQVTVKSITAYRKLDEFVGGNDIDGGA
LVVGGLPFTPISSIEDRHQKQWSQELQLLGNMGQIEWVVGGFWFRETGTDNNPVFIGALF
PPVTLDPSRGPGTGTTANIFGVPSDYLAGSDASVRNRSLAGYAHLSWKSDDFELAGGIRY
SKDNRREMLRAAGLRPFVLPAETFNASGDHWDFDATATYIINPDARFYARFATGYLSGGI
VGGIPFKAETVRSYEIGFKGDLIDQTLRVNAAAFHTDRRNVQTLAFTATAGTFILSAPKA
EESGFELELTAVPTEGLTFNTSFGYVHSKLSDNPTLGPVNSLSPKYTMNVGGQYDAPHFA
NDSYLSFRIDGAFKDKRLSDPVRNSATANLTTLPSRFDINARLSLVDLPLAGTKARVSAW
VQNLTNNQELEFARNLSTSVIGVFQVPRTYGIDVGFQF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacttgcgttcgattctgcttggttgcgttgcctgcactgcatttcacccgctg
gccgcgattgcccaggacacccaggccggtgcatccgaacgcggtctgggcgacattgtc
gtcaccgcgcgccgggtggaagaaaatctccagagcgttcctgtcgccgtcaccggcttc
aattcggaaatgctgcagaatctcaatatcgccaatttcggggatctgggcgccgccgtg
cccaatctcgatgtgcagcggcaattcggctcggcctccgcgccgcaattctatctgcgc
ggcgtttcgaccgggtcgctcaagttcgaaaccgacgccggtatcggcctctacatcgat
ggcgtctatctcggtcgcccggccggcaccgcgttcgaccttgccgatatcgaacgggtc
gaagtgctgcgcgggccgcagggcaccctgttcggacgcaactccaccggcggcgcgatc
aacttcatcaccgccgctcccagcggtgaactcaaggtcaaggtcgaaggcacgatcggc
aatttcgatcgctacaagggccgcatctcggtcgatctgcccgcattcggccccttgtca
gtgcggctgagctacctgcacgatcagaatcgcggctatgtgaagaacctgacgccgggg
cgcacctataatttcacggccccgttcggcacggttaaatccgccaaggatttcggccgc
gaaaataccgacgcgttcgccgccgccgcacggctcgatctcgacgcgctcaagatcgat
tacaaattcgactataccgacaaacgcagcacccagctcggccagcagctgctgggcttc
gaccccagctttgccgccacggcacccgccttttacggcagccccagccttgtcgtcggc
ccgtcgaccaagcgccagaaagcgctggcactcgatttcacgaccccgtcgcgcctcaag
attcaaggccacagcctgacggccgcctatgacatcagcgatcaggtcacggtcaagagc
atcaccgcctatcgcaagctcgacgaatttgtcggcggcaacgatatcgacggcggcgcg
cttgtcgttggcggcctgcccttcaccccgatttcttcgattgaagatcgccatcagaag
caatggagccaggaactccagttgctcggcaatatgggccagatcgaatgggtggtcggc
ggcttctggttccgcgaaacgggcaccgacaacaacccggtgttcatcggcgccctgttc
ccgccggtcacgctcgaccccagccgtggccccggcaccggcaccaccgccaacatcttc
ggcgtgccgagcgattatctggccggatcggacgcgtcggtgcgcaatcgctcgctcgcc
ggttacgcccatctcagctggaaaagcgacgatttcgaactggccggcggtatccgctac
agcaaggataatcgccgcgaaatgcttcgcgcggctggcctgcggcccttcgtcctgccc
gccgaaaccttcaatgcctccggcgatcattgggatttcgatgccaccgccacctatatc
atcaatccggatgcccgtttctacgcgcgcttcgcgacgggctatttgtctggcggcatc
gtcggtggaatccccttcaaggccgaaacggtcagaagctatgaaatcggcttcaagggc
gatctgatcgatcaaaccttgcgggtgaatgccgcagctttccacaccgatcgccgcaac
gtccagacgctggccttcaccgccaccgctggcacgttcattctgtccgcaccgaaggcg
gaagaaagcgggttcgagctggaactcacggcggtgccgaccgaagggctgaccttcaac
acctcgttcggctatgttcactcgaagctgtcggacaatcccacgcttggcccggtcaat
tcgctttcacccaaatatacgatgaacgtcggcggccaatatgatgcaccgcatttcgcg
aatgacagctacctgtcgttccgcatcgacggggcattcaaggataagcggctgagcgat
ccggtgcgcaacagcgcgactgccaacctcaccaccctgccgtcgcgtttcgatatcaat
gcgcggctgtcgctggtcgatctgccgctcgccggtaccaaggccagggtgagcgcctgg
gtccagaatctgacgaacaatcaggaactggaatttgcccgcaacctcagcaccagcgtg
atcggcgtgttccaggtgccacgcacctacggcatcgatgtggggttccagttctga
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